Sequence Description Alias PCC hrr PSME_00026556-RA (at3g04740 : 1277.0) encodes a protein with similarities to subunits of the Mediator complex, required for RNA polymerase II recruitment at target promoters in response to specific activators. Lines carrying loss of function mutations in the gene have reduced cell numbers in aerial organs. On the other hand, lines overexpressing the gene have increased number of small cells in clusters, suggesting cell division is more unsynchronized in the overexpressors.; STRUWWELPETER (SWP); FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: positive regulation of transcription, positive regulation of cell proliferation; LOCATED IN: mediator complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med14 (InterPro:IPR013947); Has 940 Blast hits to 375 proteins in 163 species: Archae - 0; Bacteria - 61; Metazoa - 117; Fungi - 104; Plants - 74; Viruses - 0; Other Eukaryotes - 584 (source: NCBI BLink). & (reliability: 2554.0) & (original description: no original description) 0.8564987864109953 21 PSME_00000597-RA (at5g20990 : 278.0) Involved in molybdenum cofactor (Moco) biosynthesis, inserting Mo into Molybdopterin. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.; B73; CONTAINS InterPro DOMAIN/s: Molybdenum cofactor biosynthesis, conserved site (InterPro:IPR008284), Molybdenum cofactor synthesis (InterPro:IPR020817), MoeA, N-terminal and linker domain (InterPro:IPR005110), MoeA, C-terminal, domain IV (InterPro:IPR005111), Molybdopterin binding (InterPro:IPR001453); Has 13106 Blast hits to 12710 proteins in 1951 species: Archae - 648; Bacteria - 8919; Metazoa - 385; Fungi - 192; Plants - 74; Viruses - 0; Other Eukaryotes - 2888 (source: NCBI BLink). & (reliability: 556.0) & (original description: no original description) 0.8509270978519156 43 PSME_00015580-RA (at1g50120 : 318.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rgp1 (InterPro:IPR014848), Immunoglobulin E-set (InterPro:IPR014756); Has 144 Blast hits to 140 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 86; Fungi - 10; Plants - 39; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 636.0) & (original description: no original description) 0.8448535810438019 10 PSME_00026488-RA (at1g69830 : 309.0) Encodes a plastid-localized α-amylase. Expression is reduced in the SEX4 mutant. Loss of function mutations show normal diurnal pattern of starch accumulation/degradation. Expression follows circadian rhythms.; alpha-amylase-like 3 (AMY3); FUNCTIONS IN: alpha-amylase activity; INVOLVED IN: circadian rhythm, starch catabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047), Alpha-amylase, C-terminal beta-sheet (InterPro:IPR012850); BEST Arabidopsis thaliana protein match is: alpha-amylase-like 2 (TAIR:AT1G76130.1); Has 11240 Blast hits to 11194 proteins in 2094 species: Archae - 95; Bacteria - 8555; Metazoa - 677; Fungi - 729; Plants - 646; Viruses - 0; Other Eukaryotes - 538 (source: NCBI BLink). & (p27934|amy3e_orysa : 211.0) Alpha-amylase isozyme 3E precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) - Oryza sativa (Rice) & (reliability: 618.0) & (original description: no original description) 0.8438393740460062 36 PSME_00032735-RA (at2g07050 : 662.0) Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.; cycloartenol synthase 1 (CAS1); FUNCTIONS IN: cycloartenol synthase activity; INVOLVED IN: pentacyclic triterpenoid biosynthetic process, thylakoid membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lanosterol synthase 1 (TAIR:AT3G45130.1); Has 2063 Blast hits to 1929 proteins in 563 species: Archae - 2; Bacteria - 902; Metazoa - 86; Fungi - 243; Plants - 616; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (reliability: 1324.0) & (original description: no original description) 0.8318279897574091 91 PSME_00042167-RA (q43848|tktc_soltu : 1129.0) Transketolase, chloroplast precursor (EC 2.2.1.1) (TK) - Solanum tuberosum (Potato) & (at3g60750 : 1094.0) Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826), Transketolase, bacterial-like (InterPro:IPR005478), Transketolase-like, C-terminal (InterPro:IPR015941); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT2G45290.1). & (reliability: 2188.0) & (original description: no original description) 0.8314062059580037 7 PSME_00033571-RA (at1g70580 : 368.0) Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro.; alanine-2-oxoglutarate aminotransferase 2 (AOAT2); FUNCTIONS IN: glycine:2-oxoglutarate aminotransferase activity, L-alanine:2-oxoglutarate aminotransferase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: glutamate:glyoxylate aminotransferase (TAIR:AT1G23310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p52894|ala2_horvu : 249.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (reliability: 736.0) & (original description: no original description) 0.8268388277771433 70 PSME_00034248-RA (at3g54440 : 249.0) glycoside hydrolase family 2 protein; FUNCTIONS IN: carbohydrate binding, cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: male gametophyte, guard cell; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (InterPro:IPR006102), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 42, domain 5 (InterPro:IPR004199), Glycoside hydrolase family 2, TIM barrel (InterPro:IPR006103), Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Glycoside hydrolase, family 2 (InterPro:IPR006101), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Galactose-binding domain-like (InterPro:IPR008979), Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain (InterPro:IPR013812), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781). & (reliability: 498.0) & (original description: no original description) 0.8264123098157405 52 PSME_00002623-RA (at1g18890 : 771.0) encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro.; calcium-dependent protein kinase 1 (CDPK1); FUNCTIONS IN: calmodulin-dependent protein kinase activity, protein kinase activity, kinase activity; INVOLVED IN: response to water deprivation, response to salt stress, protein amino acid phosphorylation, N-terminal protein myristoylation, abscisic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 30 (TAIR:AT1G74740.1); Has 125370 Blast hits to 119826 proteins in 3847 species: Archae - 176; Bacteria - 14154; Metazoa - 46310; Fungi - 16874; Plants - 24900; Viruses - 438; Other Eukaryotes - 22518 (source: NCBI BLink). & (p53683|cdpk2_orysa : 541.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (reliability: 1542.0) & (original description: no original description) 0.8260211373777628 47 PSME_00033493-RA (at5g53170 : 451.0) encodes an FtsH protease that is localized to the chloroplast and the mitochondrion; FTSH protease 11 (FTSH11); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: response to heat, PSII associated light-harvesting complex II catabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 4 (TAIR:AT2G26140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5z974|ftsh_orysa : 233.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 902.0) & (original description: no original description) 0.819851401014502 12 PSME_00000075-RA (at5g66150 : 247.0) Glycosyl hydrolase family 38 protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: mannose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sperm cell, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Glycoside hydrolase/deacetylase, beta/alpha-barrel (InterPro:IPR011330), Glycoside hydrolase, family 38, central domain (InterPro:IPR015341), Glycoside hydrolase, family 38, core (InterPro:IPR000602), Glycosyl hydrolases 38, C-terminal (InterPro:IPR011682); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 38 protein (TAIR:AT5G13980.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 494.0) & (original description: no original description) 0.8166711551326054 95 PSME_00004940-RA (q02028|hsp7s_pea : 1073.0) Stromal 70 kDa heat shock-related protein, chloroplast precursor - Pisum sativum (Garden pea) & (at4g24280 : 1067.0) Involved in protein import into chloroplasts during early developmental stages.; chloroplast heat shock protein 70-1 (cpHsc70-1); FUNCTIONS IN: protein binding, ATP binding; INVOLVED IN: protein folding, response to cadmium ion, protein targeting to chloroplast, response to cold; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Chaperone DnaK (InterPro:IPR012725), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: chloroplast heat shock protein 70-2 (TAIR:AT5G49910.1); Has 36155 Blast hits to 36031 proteins in 4857 species: Archae - 160; Bacteria - 17964; Metazoa - 3544; Fungi - 1694; Plants - 1235; Viruses - 354; Other Eukaryotes - 11204 (source: NCBI BLink). & (reliability: 2134.0) & (original description: no original description) 0.8110960265614358 56 PSME_00012443-RA (at1g69220 : 220.0) Encodes a putative serine/threonine kinase (SIK1).; SIK1; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: mitochondrion, chromosome, centromeric region, chromosome, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G53165.2); Has 135073 Blast hits to 131353 proteins in 4820 species: Archae - 174; Bacteria - 17099; Metazoa - 50056; Fungi - 12728; Plants - 33057; Viruses - 559; Other Eukaryotes - 21400 (source: NCBI BLink). & (reliability: 440.0) & (original description: no original description) 0.8108648500360254 76 PSME_00018317-RA (at3g46740 : 982.0) Component of the translocon outer membrane (TOC) complex. Forms the outer envelope translocation channel (beta-barrel). Plays a role in preprotein conductance. Imported into chloroplast. Expressed in young dividing photosynthetic tissues. Knockout mutants are embryo lethal with arrested development at the two-cell stage. Knockout mutants have abnormal etioplasts.; translocon at the outer envelope membrane of chloroplasts 75-III (TOC75-III); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein targeting to chloroplast, chloroplast organization, embryonic morphogenesis; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial surface antigen (D15) (InterPro:IPR000184), Chloroplast envelope protein translocase, IAP75 (InterPro:IPR005689), Surface antigen variable number (InterPro:IPR010827); BEST Arabidopsis thaliana protein match is: Outer membrane OMP85 family protein (TAIR:AT4G09080.1); Has 4030 Blast hits to 1859 proteins in 343 species: Archae - 0; Bacteria - 806; Metazoa - 1937; Fungi - 82; Plants - 633; Viruses - 22; Other Eukaryotes - 550 (source: NCBI BLink). & (q43715|toc75_pea : 955.0) Protein TOC75, chloroplast precursor (75 kDa translocon at the outer-envelope-membrane of chloroplasts) (Import intermediate associated protein of 75 kDa) (75 kDa chloroplast outer envelope protein) - Pisum sativum (Garden pea) & (reliability: 1964.0) & (original description: no original description) 0.8093359322082972 64 PSME_00012714-RA (at3g57660 : 509.0) Encodes a subunit of RNA polymerase I (aka RNA polymerase A).; nuclear RNA polymerase A1 (NRPA1); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), DNA-directed RNA pol I, largest subunit (InterPro:IPR015699), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1); Has 39638 Blast hits to 28014 proteins in 7318 species: Archae - 983; Bacteria - 11101; Metazoa - 5787; Fungi - 2930; Plants - 6395; Viruses - 781; Other Eukaryotes - 11661 (source: NCBI BLink). & (p56300|rpoc1_chlvu : 92.8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) - Chlorella vulgaris (Green alga) & (reliability: 1018.0) & (original description: no original description) 0.8064477485362566 46 PSME_00002997-RA (at3g09100 : 725.0) mRNA capping enzyme family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422), ATP dependent DNA ligase, central (InterPro:IPR012310), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT5G01290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1384.0) & (original description: no original description) 0.8061866085055179 29 PSME_00037300-RA (at1g48520 : 358.0) Encodes Glu-tRNA(Gln) amidotransferase subunit B (from Genbank record AF239836).; GLU-ADT subunit B (GATB); FUNCTIONS IN: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor, ligase activity; INVOLVED IN: glutamyl-tRNA aminoacylation, translation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site (InterPro:IPR017958), Glutamyl-tRNA(Gln) amidotransferase, B subunit (InterPro:IPR004413), Aspartyl/glutamyl-tRNA amidotransferase subunit B-related (InterPro:IPR003789), Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E (InterPro:IPR017959), Asn/Gln amidotransferase (InterPro:IPR018027), Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal (InterPro:IPR006075); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 716.0) & (original description: no original description) 0.8056192200558219 27 PSME_00006930-RA (p34811|efgc_soybn : 1202.0) Elongation factor G, chloroplast precursor (EF-G) - Glycine max (Soybean) & (at1g62750 : 1195.0) Nuclear encoded protein consists of the five domains conserved in EF-G proteins, with two GTP-binding sites in the first domain, and an additional transit peptide at the N-terminus. Localized in chloroplasts. Point mutation results in a delay in the onset of germination. At early developmental stage embryos still contain undifferentiated proplastids. The greening of cotyledons is severely impaired in light-grown mutant sco1 seedlings, whereas the following true leaves develop normally as in wild-type plants.; SNOWY COTYLEDON 1 (SCO1); FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, ATP binding; INVOLVED IN: post-embryonic development, chloroplast organization, seed germination; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFG/EF2 (InterPro:IPR004540), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EFG/EF2 protein (TAIR:AT2G45030.1); Has 79823 Blast hits to 67706 proteins in 7071 species: Archae - 929; Bacteria - 47320; Metazoa - 4453; Fungi - 5428; Plants - 1613; Viruses - 3; Other Eukaryotes - 20077 (source: NCBI BLink). & (reliability: 2390.0) & (original description: no original description) 0.8053969505726616 28 PSME_00000901-RA (at5g13000 : 1037.0) encodes a gene similar to callose synthase; glucan synthase-like 12 (GSL12); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: callose synthase 1 (TAIR:AT1G05570.1); Has 1373 Blast hits to 1031 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 71; Fungi - 677; Plants - 549; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 2074.0) & (original description: no original description) 0.8024086966580412 84 PSME_00007741-RA (at5g64940 : 180.0) Encodes a member of ATH subfamily of ATP-binding cassette (ABC) proteins.; ABC2 homolog 13 (ATH13); FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G07700.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 360.0) & (original description: no original description) 0.7986598144514567 51 PSME_00012168-RA (at3g14120 : 421.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport; LOCATED IN: nuclear pore; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear pore protein 84/107 (InterPro:IPR007252). & (reliability: 842.0) & (original description: no original description) 0.796402660967941 35 PSME_00005604-RA (at5g65010 : 620.0) Encodes asparagine synthetase (ASN2).; asparagine synthetase 2 (ASN2); FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity; INVOLVED IN: asparagine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Asparagine synthase (InterPro:IPR001962), Asparagine synthase, glutamine-hydrolyzing (InterPro:IPR006426), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: asparagine synthetase 3 (TAIR:AT5G10240.1); Has 12646 Blast hits to 12280 proteins in 2301 species: Archae - 400; Bacteria - 7857; Metazoa - 213; Fungi - 272; Plants - 420; Viruses - 7; Other Eukaryotes - 3477 (source: NCBI BLink). & (p31752|asns_aspof : 607.0) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (AS) - Asparagus officinalis (Garden asparagus) & (reliability: 1240.0) & (original description: no original description) 0.7920770218977515 49 PSME_00023439-RA (at1g72090 : 488.0) Methylthiotransferase; FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, iron-sulfur cluster binding, catalytic activity; INVOLVED IN: metabolic process, RNA modification; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methylthiotransferase (InterPro:IPR005839), Aldolase-type TIM barrel (InterPro:IPR013785), Methylthiotransferase, conserved site (InterPro:IPR020612), Methylthiotransferase, N-terminal (InterPro:IPR013848), Radical SAM (InterPro:IPR007197), Deoxyribonuclease/rho motif-related TRAM (InterPro:IPR002792), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), MiaB-like tRNA modifying enzyme, archaeal-type (InterPro:IPR006466); BEST Arabidopsis thaliana protein match is: Methylthiotransferase (TAIR:AT4G36390.1); Has 15738 Blast hits to 15705 proteins in 2423 species: Archae - 403; Bacteria - 9758; Metazoa - 296; Fungi - 1; Plants - 135; Viruses - 0; Other Eukaryotes - 5145 (source: NCBI BLink). & (q2r1u4|ck5p1_orysa : 80.1) CDK5RAP1-like protein - Oryza sativa (Rice) & (reliability: 976.0) & (original description: no original description) 0.7911818936567196 83 PSME_00037819-RA (at1g06240 : 127.0) Protein of unknown function DUF455; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF455 (InterPro:IPR007402); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF455 (TAIR:AT5G04520.1); Has 954 Blast hits to 954 proteins in 412 species: Archae - 0; Bacteria - 697; Metazoa - 13; Fungi - 46; Plants - 75; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (reliability: 254.0) & (original description: no original description) 0.7897867528615539 48 PSME_00007643-RA (at2g41790 : 182.0) Insulinase (Peptidase family M16) family protein; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) family protein (TAIR:AT3G57470.2); Has 9660 Blast hits to 9541 proteins in 2186 species: Archae - 9; Bacteria - 6247; Metazoa - 831; Fungi - 633; Plants - 271; Viruses - 3; Other Eukaryotes - 1666 (source: NCBI BLink). & (reliability: 364.0) & (original description: no original description) 0.7887913383994319 52 PSME_00007930-RA (at1g49630 : 463.0) Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed in flower, leaf and root. Not expressed in silique and shoot.; presequence protease 2 (PREP2); FUNCTIONS IN: metallopeptidase activity, metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding; INVOLVED IN: proteolysis, protein maturation by peptide bond cleavage; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16C associated (InterPro:IPR013578), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: presequence protease 1 (TAIR:AT3G19170.1); Has 3964 Blast hits to 3937 proteins in 1352 species: Archae - 7; Bacteria - 2621; Metazoa - 205; Fungi - 264; Plants - 79; Viruses - 0; Other Eukaryotes - 788 (source: NCBI BLink). & (reliability: 926.0) & (original description: no original description) 0.788014765430007 55 PSME_00035525-RA (at3g20290 : 294.0) Encodes AtEHD1, one of the Arabidopsis Eps15 homology domain proteins involved in endocytosis (AtEHD2, At4g05520).; EPS15 homology domain 1 (EHD1); FUNCTIONS IN: GTP binding, GTPase activity, calcium ion binding; INVOLVED IN: endocytosis; LOCATED IN: endosome, microsome, membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EPS15 homology (EH) (InterPro:IPR000261), Dynamin, GTPase domain (InterPro:IPR001401), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: EPS15 homology domain 2 (TAIR:AT4G05520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 588.0) & (original description: no original description) 0.7849491477718272 59 PSME_00015328-RA (at1g52360 : 424.0) Coatomer, beta' subunit; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 (InterPro:IPR011048), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Coatomer, beta' subunit (InterPro:IPR016453), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, beta' subunit (TAIR:AT3G15980.3). & (p93107|pf20_chlre : 94.7) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 848.0) & (original description: no original description) 0.7811807755288066 95 PSME_00023372-RA (at4g04850 : 325.0) member of Putative potassium transporter family; K+ efflux antiporter 3 (KEA3); FUNCTIONS IN: potassium:hydrogen antiporter activity, potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, cation transport, metabolic process, transmembrane transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153), NAD(P)-binding domain (InterPro:IPR016040), Regulator of K+ conductance, N-terminal (InterPro:IPR003148); BEST Arabidopsis thaliana protein match is: K+ efflux antiporter 1 (TAIR:AT1G01790.1). & (reliability: 650.0) & (original description: no original description) 0.778349484158954 68 PSME_00047081-RA (at1g18485 : 652.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 47794 Blast hits to 13382 proteins in 245 species: Archae - 0; Bacteria - 5; Metazoa - 44; Fungi - 66; Plants - 47218; Viruses - 0; Other Eukaryotes - 461 (source: NCBI BLink). & (q76c99|rf1_orysa : 121.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1304.0) & (original description: no original description) 0.7721951707087976 88 PSME_00011259-RA (at5g35910 : 361.0) Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain (TAIR:AT1G54440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 722.0) & (original description: no original description) 0.7683270353828271 98