Sequence Description Alias PCC hrr PSME_00011184-RA (at1g65680 : 174.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B2 (EXPB2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 2190 Blast hits to 2184 proteins in 158 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 26; Plants - 2110; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (q6h676|exb11_orysa : 172.0) Expansin-B11 precursor (OsEXPB11) (Beta-expansin-11) (OsaEXPb1.20) - Oryza sativa (Rice) & (reliability: 348.0) & (original description: no original description) 0.6375747076050345 81 PSME_00012051-RA (at2g36830 : 238.0) Encodes a tonoplast intrinsic protein, which functions as water channel. It has also been shown to be able to facilitate the transport of urea and hydrogen peroxide. Highly expressed in vascular tissues of the root, stem, cauline leaves and flowers but not in the apical meristems.; gamma tonoplast intrinsic protein (GAMMA-TIP); FUNCTIONS IN: water channel activity, urea transmembrane transporter activity; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: tonoplast intrinsic protein 2 (TAIR:AT3G26520.1); Has 11016 Blast hits to 10983 proteins in 2213 species: Archae - 82; Bacteria - 5238; Metazoa - 1501; Fungi - 451; Plants - 2489; Viruses - 0; Other Eukaryotes - 1255 (source: NCBI BLink). & (p50156|tip11_orysa : 233.0) Probable aquaporin TIP1.1 (Tonoplast intrinsic protein 1.1) (OsTIP1.1) (rTIP1) - Oryza sativa (Rice) & (reliability: 476.0) & (original description: no original description) 0.6229370602981026 37 PSME_00012878-RA (at1g52880 : 280.0) Transcription factor with a NAC domain. Homologous to the petunia gene NAM which is required for the development of the shoot. Expressed in the embryo.; NO APICAL MERISTEM (NAM); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 2 (TAIR:AT3G15510.1); Has 3040 Blast hits to 3032 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 3034; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (q52qh4|nac68_orysa : 240.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 552.0) & (original description: no original description) 0.6076577637523874 78 PSME_00054628-RA no hits & (original description: no original description) 0.606466401281319 4 PSME_00001297-RA (at2g23810 : 155.0) Member of TETRASPANIN family; tetraspanin8 (TET8); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, conserved site (InterPro:IPR018503), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: tetraspanin9 (TAIR:AT4G30430.1); Has 603 Blast hits to 600 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 0; Plants - 433; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 310.0) & (original description: no original description) 0.570285588072271 95 PSME_00000534-RA no hits & (original description: no original description) 0.5674306610536678 40 PSME_00037372-RA (at1g67100 : 190.0) LOB domain-containing protein 40 (LBD40); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 41 (TAIR:AT3G02550.1); Has 635 Blast hits to 634 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 635; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 380.0) & (original description: no original description) 0.5635372648629419 59 PSME_00040434-RA (at2g02450 : 172.0) NAC domain containing protein 35 (NAC035); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 94 (TAIR:AT5G39820.1); Has 5401 Blast hits to 4721 proteins in 140 species: Archae - 0; Bacteria - 7; Metazoa - 144; Fungi - 68; Plants - 2924; Viruses - 5; Other Eukaryotes - 2253 (source: NCBI BLink). & (q7f2l3|nac48_orysa : 149.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (reliability: 314.0) & (original description: no original description) 0.557918914069432 72 PSME_00016194-RA (at5g52210 : 105.0) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.; GTP-binding protein 1 (GB1); FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1F (TAIR:AT1G10630.1); Has 10306 Blast hits to 10286 proteins in 478 species: Archae - 29; Bacteria - 165; Metazoa - 4931; Fungi - 1428; Plants - 1618; Viruses - 0; Other Eukaryotes - 2135 (source: NCBI BLink). & (reliability: 210.0) & (original description: no original description) 0.5556514456514471 37 PSME_00042927-RA (at4g40080 : 92.4) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT5G10410.1); Has 479 Blast hits to 479 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 157; Fungi - 0; Plants - 318; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 184.8) & (original description: no original description) 0.5538885508259123 66 PSME_00005879-RA no hits & (original description: no original description) 0.5371269334806492 42 PSME_00003868-RA (p30278|ccnb2_medsa : 305.0) G2/mitotic-specific cyclin-2 (B-like cyclin) (CycMs2) (Fragment) - Medicago sativa (Alfalfa) & (at1g76310 : 301.0) core cell cycle genes; CYCLIN B2;4 (CYCB2;4); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin B2;3 (TAIR:AT1G20610.1); Has 4261 Blast hits to 4252 proteins in 371 species: Archae - 0; Bacteria - 0; Metazoa - 1989; Fungi - 541; Plants - 1112; Viruses - 30; Other Eukaryotes - 589 (source: NCBI BLink). & (reliability: 592.0) & (original description: no original description) 0.5301978326743575 47 PSME_00046964-RA (at3g52120 : 167.0) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SWAP/Surp (InterPro:IPR000061), D111/G-patch (InterPro:IPR000467); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 334.0) & (original description: no original description) 0.529435031588012 48 PSME_00040160-RA (at3g13224 : 198.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G40490.1); Has 77800 Blast hits to 37058 proteins in 1622 species: Archae - 33; Bacteria - 18580; Metazoa - 32661; Fungi - 6344; Plants - 11400; Viruses - 392; Other Eukaryotes - 8390 (source: NCBI BLink). & (reliability: 396.0) & (original description: no original description) 0.5289336584135339 49 PSME_00034494-RA no hits & (original description: no original description) 0.5272595723587454 50 PSME_00050613-RA (at1g26760 : 156.0) SET domain protein 35 (SDG35); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: SET domain group 37 (TAIR:AT2G17900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 312.0) & (original description: no original description) 0.5200675911537008 68 PSME_00013641-RA no hits & (original description: no original description) 0.5057315378148839 73 PSME_00048849-RA (at3g58190 : 104.0) This gene contains two auxin-responsive element (AuxRE).; lateral organ boundaries-domain 29 (LBD29); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: Lateral organ boundaries (LOB) domain family protein (TAIR:AT2G42440.1); Has 858 Blast hits to 853 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 858; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 208.0) & (original description: no original description) 0.492923024755841 77 PSME_00025832-RA (at3g21510 : 188.0) Encodes AHP1, one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).; histidine-containing phosphotransmitter 1 (AHP1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, phosphotransfer (Hpt) domain (InterPro:IPR008207); BEST Arabidopsis thaliana protein match is: histidine-containing phosphotransfer factor 5 (TAIR:AT1G03430.1); Has 358 Blast hits to 357 proteins in 69 species: Archae - 2; Bacteria - 42; Metazoa - 0; Fungi - 41; Plants - 268; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (q6vak4|hp1_orysa : 133.0) Histidine-containing phosphotransfer protein 1 (OsHP1) - Oryza sativa (Rice) & (reliability: 346.0) & (original description: no original description) 0.489083731702833 80