Sequence Description Alias PCC hrr PSME_00013311-RA (at4g17170 : 379.0) member of RAB gene family; RAB GTPase homolog B1C (RABB1C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ER to Golgi vesicle-mediated transport, pollen sperm cell differentiation, cell growth; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: GTP-binding 2 (TAIR:AT4G35860.1); Has 27116 Blast hits to 27043 proteins in 734 species: Archae - 17; Bacteria - 131; Metazoa - 14131; Fungi - 4055; Plants - 2966; Viruses - 20; Other Eukaryotes - 5796 (source: NCBI BLink). & (p49104|rab2b_maize : 365.0) Ras-related protein Rab-2-B - Zea mays (Maize) & (reliability: 758.0) & (original description: no original description) 0.8395632357512417 2 PSME_00040931-RA (at4g14710 : 288.0) ATARD2; FUNCTIONS IN: acireductone dioxygenase [iron(II)-requiring] activity, metal ion binding; INVOLVED IN: oxidation reduction, L-methionine salvage from methylthioadenosine; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Acireductone dioxygenase, ARD (InterPro:IPR004313), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: acireductone dioxygenase 1 (TAIR:AT4G14716.1). & (q58fk4|ard2_orysa : 273.0) 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 (EC 1.13.-.-) (Aci-reductone dioxygenase 2) (Submergence-induced protein 2A) - Oryza sativa (Rice) & (reliability: 576.0) & (original description: no original description) 0.8183055011634187 2 PSME_00050572-RA (at5g53160 : 265.0) Encodes RCAR3, a regulatory component of ABA receptor. Interacts with protein phosphatase 2Cs ABI1 and ABI2. Stimulates ABA signaling.; regulatory components of ABA receptor 3 (RCAR3); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: regulatory component of ABA receptor 1 (TAIR:AT1G01360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 530.0) & (original description: no original description) 0.8132555177555365 3 PSME_00056859-RA (at1g04640 : 314.0) Lipoyltransferase, located in mitochondria but not found in chloroplasts; lipoyltransferase 2 (LIP2); CONTAINS InterPro DOMAIN/s: Octanoyltransferase (InterPro:IPR000544), Octanoyltransferase, conserved site (InterPro:IPR020605), Biotin/lipoate A/B protein ligase (InterPro:IPR004143); BEST Arabidopsis thaliana protein match is: Biotin/lipoate A/B protein ligase family (TAIR:AT4G31050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 628.0) & (original description: no original description) 0.7837601734229598 9 PSME_00027831-RA (at3g59280 : 166.0) mutant exhibited resistance to growth on media containing thaxtomin due to a difference in the rate of uptake of the toxin.We proposed that TXR1 is a component of, or regulator of, a dispensable transport mechanism.; THAXTOMIN A RESISTANT 1 (TXR1); INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein Transporter, Pam16 (InterPro:IPR005341); BEST Arabidopsis thaliana protein match is: Protein Transporter, Pam16 (TAIR:AT5G61880.2); Has 398 Blast hits to 398 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 132; Plants - 79; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 332.0) & (original description: no original description) 0.7829350735424262 5 PSME_00033204-RA (at4g22140 : 337.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 674.0) & (original description: no original description) 0.7786663128932511 6 PSME_00009958-RA (at5g23550 : 184.0) Got1/Sft2-like vescicle transport protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Got1/SFT2-like (InterPro:IPR007305), Vesicle transport protein, SFT2-like (InterPro:IPR011691); BEST Arabidopsis thaliana protein match is: Got1/Sft2-like vescicle transport protein family (TAIR:AT5G24170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 368.0) & (original description: no original description) 0.7434844352076392 12 PSME_00000346-RA (at5g17400 : 322.0) This gene is predicted to encode an ER-localized adenine nucleotide transporter with six putative transmembrane helices. It appears to act as a ATP:ADP antiporter when expressed in E.coli plasma membranes. Transcript levels for several ER-localized chaperones (e.g. BIP1/2) and other ATP-requiring ER proteins (e.g. CPK2) are reduced in er-ant1 knock-out lines, suggesting a lack of adequate ATP transport into the ER in these mutants. They also have reduced seed oil and seed protein levels.; endoplasmic reticulum-adenine nucleotide transporter 1 (ER-ANT1); CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 3 (TAIR:AT4G28390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p31691|adt_orysa : 284.0) ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT) - Oryza sativa (Rice) & (reliability: 644.0) & (original description: no original description) 0.7405177608010991 32 PSME_00050242-RA (at3g28630 : 289.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF569 (InterPro:IPR007679), Actin cross-linking (InterPro:IPR008999); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF569) (TAIR:AT3G01311.1); Has 232 Blast hits to 210 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 578.0) & (original description: no original description) 0.7357039195106827 15 PSME_00018062-RA (at4g02450 : 94.0) HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT3G03773.1); Has 981 Blast hits to 954 proteins in 256 species: Archae - 7; Bacteria - 144; Metazoa - 401; Fungi - 86; Plants - 167; Viruses - 20; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 188.0) & (original description: no original description) 0.7337552915685809 21 PSME_00007974-RA (at2g28060 : 119.0) 5'-AMP-activated protein kinase beta-2 subunit protein; CONTAINS InterPro DOMAIN/s: 5-AMP-activated protein kinase, beta subunit, interaction domain (InterPro:IPR006828); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase beta-2 subunit protein (TAIR:AT5G21170.2); Has 379 Blast hits to 379 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 199; Fungi - 21; Plants - 141; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 238.0) & (original description: no original description) 0.7299997927653443 17 PSME_00002132-RA (at2g19690 : 131.0) One of four PLA2 genes in Arabidopsis. Involved in stomatal opening in response to light. Expressed in guard cells.; phospholipase A2-beta (PLA2-BETA); FUNCTIONS IN: phospholipase A2 activity, calcium ion binding; INVOLVED IN: response to light stimulus, regulation of stomatal movement; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: vascular tissue, leaf mesophyll, guard cell; CONTAINS InterPro DOMAIN/s: Phospholipase A2, active site (InterPro:IPR013090), Phospholipase A2 (InterPro:IPR016090), Phospholipase A2, eukaryotic (InterPro:IPR001211); BEST Arabidopsis thaliana protein match is: Phospholipase A2 family protein (TAIR:AT4G29460.1). & (reliability: 262.0) & (original description: no original description) 0.7269964714797507 19 PSME_00044675-RA (at5g03220 : 212.0) Mediator complex, subunit Med7; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med7 (InterPro:IPR009244); BEST Arabidopsis thaliana protein match is: Mediator complex, subunit Med7 (TAIR:AT5G03500.3); Has 403 Blast hits to 401 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 158; Plants - 58; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 424.0) & (original description: no original description) 0.7245050868618241 20 PSME_00047120-RA (at1g34770 : 256.0) CONTAINS InterPro DOMAIN/s: MAGE protein (InterPro:IPR002190); Has 1274 Blast hits to 1260 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 1104; Fungi - 45; Plants - 49; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 512.0) & (original description: no original description) 0.7235916112642702 21 PSME_00002064-RA (at4g02840 : 176.0) Small nuclear ribonucleoprotein family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT3G07590.2). & (reliability: 352.0) & (original description: no original description) 0.7018085414544954 72 PSME_00001700-RA (at1g13580 : 377.0) LAG1 longevity assurance homolog 3 (LAG13); CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G25540.1). & (q6eun0|ascl1_orysa : 367.0) ASC1-like protein 1 (Alternaria stem canker resistance-like protein 1) - Oryza sativa (Rice) & (reliability: 754.0) & (original description: no original description) 0.7002373621720579 34 PSME_00010293-RA (at5g58070 : 207.0) Encodes a temperature-induced lipocalin TIL1. Involved in thermotolerance. Peripherally associated with plasma membrane.; temperature-induced lipocalin (TIL); FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, response to cold, response to light stimulus, response to heat; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Lipocalin, bacterial (InterPro:IPR002446), Lipocalin, ApoD type (InterPro:IPR022271), Lipocalin-like (InterPro:IPR013208), Lipocalin conserved site (InterPro:IPR022272), Calycin (InterPro:IPR012674), Calycin-like (InterPro:IPR011038); Has 2007 Blast hits to 1991 proteins in 692 species: Archae - 0; Bacteria - 1480; Metazoa - 169; Fungi - 10; Plants - 132; Viruses - 6; Other Eukaryotes - 210 (source: NCBI BLink). & (reliability: 414.0) & (original description: no original description) 0.6995578207942513 29 PSME_00033920-RA (at1g49590 : 135.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, U1-C type (InterPro:IPR013085), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type matrin (InterPro:IPR000690). & (reliability: 270.0) & (original description: no original description) 0.6941072401529005 98 PSME_00055724-RA no hits & (original description: no original description) 0.6887215576262569 36 PSME_00027018-RA no hits & (original description: no original description) 0.6827045952111853 38 PSME_00055317-RA (at1g17455 : 88.2) ELF4-like 4 (ELF4-L4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1313 (InterPro:IPR009741); BEST Arabidopsis thaliana protein match is: ELF4-like 2 (TAIR:AT1G72630.1); Has 149 Blast hits to 148 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 148; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 176.4) & (original description: no original description) 0.6801086457503815 40 PSME_00039041-RA (at2g29640 : 223.0) JOSEPHIN-like protein (JOSL); CONTAINS InterPro DOMAIN/s: Machado-Joseph disease protein MJD (InterPro:IPR006155); BEST Arabidopsis thaliana protein match is: josephin protein-related (TAIR:AT1G07300.1); Has 526 Blast hits to 526 proteins in 96 species: Archae - 0; Bacteria - 0; Metazoa - 376; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 446.0) & (original description: no original description) 0.679781016674368 41 PSME_00003205-RA (at3g09770 : 323.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G03200.1); Has 7619 Blast hits to 4715 proteins in 450 species: Archae - 8; Bacteria - 442; Metazoa - 2165; Fungi - 884; Plants - 2938; Viruses - 368; Other Eukaryotes - 814 (source: NCBI BLink). & (reliability: 646.0) & (original description: no original description) 0.6755361806613196 45 PSME_00011331-RA (at1g17455 : 135.0) ELF4-like 4 (ELF4-L4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1313 (InterPro:IPR009741); BEST Arabidopsis thaliana protein match is: ELF4-like 2 (TAIR:AT1G72630.1); Has 149 Blast hits to 148 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 148; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 270.0) & (original description: no original description) 0.6636977876789888 51 PSME_00036545-RA (at3g07880 : 184.0) SUPERCENTIPEDE1 (SCN1); FUNCTIONS IN: Rho GDP-dissociation inhibitor activity; INVOLVED IN: root epidermal cell differentiation, cell tip growth; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), RHO protein GDP dissociation inhibitor (InterPro:IPR000406); BEST Arabidopsis thaliana protein match is: Immunoglobulin E-set superfamily protein (TAIR:AT1G62450.1); Has 660 Blast hits to 660 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 325; Fungi - 162; Plants - 120; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 368.0) & (original description: no original description) 0.6534776330731232 63 PSME_00005984-RA (at1g17455 : 134.0) ELF4-like 4 (ELF4-L4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1313 (InterPro:IPR009741); BEST Arabidopsis thaliana protein match is: ELF4-like 2 (TAIR:AT1G72630.1); Has 149 Blast hits to 148 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 148; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 268.0) & (original description: no original description) 0.64700035734459 68 PSME_00009619-RA (at2g34190 : 99.0) Xanthine/uracil permease family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT2G05760.1); Has 8712 Blast hits to 8692 proteins in 1893 species: Archae - 67; Bacteria - 7003; Metazoa - 354; Fungi - 119; Plants - 444; Viruses - 1; Other Eukaryotes - 724 (source: NCBI BLink). & (reliability: 198.0) & (original description: no original description) 0.6455728441506126 70 PSME_00042140-RA (at4g31290 : 222.0) ChaC-like family protein; CONTAINS InterPro DOMAIN/s: ChaC-like protein (InterPro:IPR006840); BEST Arabidopsis thaliana protein match is: ChaC-like family protein (TAIR:AT5G26220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 444.0) & (original description: no original description) 0.6412258059665854 82 PSME_00032426-RA (at1g03330 : 101.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), U6 snRNA-associated Sm-like protein LSm2 (InterPro:IPR016654), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); Has 762 Blast hits to 762 proteins in 209 species: Archae - 2; Bacteria - 0; Metazoa - 303; Fungi - 225; Plants - 97; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (reliability: 202.0) & (original description: no original description) 0.6370552329029852 86 PSME_00043699-RA (at3g47160 : 298.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G58787.1). & (reliability: 596.0) & (original description: no original description) 0.629430540493989 100