Sequence Description Alias PCC hrr PSME_00042215-RA (q9m3v8|rs6_aspof : 362.0) 40S ribosomal protein S6 - Asparagus officinalis (Garden asparagus) & (at4g31700 : 360.0) Encodes a putative ribosomal protein S6 (rps6a). RPS6A and RPS6B are fully redundant and essential during gametogenesis.; ribosomal protein S6 (RPS6); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: growth, translation; LOCATED IN: cytosolic small ribosomal subunit, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S6e (InterPro:IPR001377); BEST Arabidopsis thaliana protein match is: Ribosomal protein S6e (TAIR:AT5G10360.1); Has 870 Blast hits to 868 proteins in 314 species: Archae - 19; Bacteria - 0; Metazoa - 402; Fungi - 166; Plants - 138; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink). & (reliability: 720.0) & (original description: no original description) 0.8898104339794111 1 PSME_00019501-RA (p42056|vdac2_soltu : 399.0) 36 kDa outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) (POM 36) - Solanum tuberosum (Potato) & (at3g01280 : 363.0) Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol.; voltage dependent anion channel 1 (VDAC1); FUNCTIONS IN: voltage-gated anion channel activity; INVOLVED IN: response to bacterium, anion transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925); BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 3 (TAIR:AT5G15090.2); Has 888 Blast hits to 888 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 413; Fungi - 146; Plants - 300; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (reliability: 726.0) & (original description: no original description) 0.8821194366804287 3 PSME_00003426-RA (at3g25585 : 119.0) aminoalcoholphosphotransferase (AAPT2) mRNA, complete cds; aminoalcoholphosphotransferase (AAPT2); FUNCTIONS IN: phosphatidyltransferase activity, phosphotransferase activity, for other substituted phosphate groups; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Choline/ethanolaminephosphotransferase (InterPro:IPR014472), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: aminoalcoholphosphotransferase 1 (TAIR:AT1G13560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 238.0) & (original description: no original description) 0.8312440767003545 7 PSME_00000085-RA no hits & (original description: no original description) 0.8286629975727452 19 PSME_00003421-RA (p00074|cyc_ginbi : 219.0) Cytochrome c - Ginkgo biloba (Ginkgo) & (at1g22840 : 210.0) Encodes cytochrome c. Contains two site II (TGGGCC/T) elements, which interact with a TCP-domain transcription factor, and a downstream internal telomeric repeat, and are required for expression of the Cytc-1 gene. Promoter directs preferential expression in root and shoot meristems and in anthers.; CYTOCHROME C-1 (CYTC-1); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: cell proliferation; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c, class IA/ IB (InterPro:IPR002327), Cytochrome c, class I (InterPro:IPR003088), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: cytochrome c-2 (TAIR:AT4G10040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 420.0) & (original description: no original description) 0.8274233918406261 19 PSME_00042409-RA (at2g01250 : 328.0) Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, chloroplast, plasma membrane, large ribosomal subunit, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT3G13580.1); Has 1075 Blast hits to 1075 proteins in 310 species: Archae - 55; Bacteria - 0; Metazoa - 442; Fungi - 204; Plants - 182; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (reliability: 656.0) & (original description: no original description) 0.8223817120461973 6 PSME_00018579-RA (q9ayp4|rs10_orysa : 192.0) 40S ribosomal protein S10 - Oryza sativa (Rice) & (at4g25740 : 172.0) RNA binding Plectin/S10 domain-containing protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plectin/S10, N-terminal (InterPro:IPR005326); BEST Arabidopsis thaliana protein match is: RNA binding Plectin/S10 domain-containing protein (TAIR:AT5G52650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 344.0) & (original description: no original description) 0.8178802675684312 38 PSME_00045635-RA (at4g09800 : 254.0) encodes a ribosomal protein S18C, a constituent of the small subunit of the ribosomal complex; S18 ribosomal protein (RPS18C); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleic acid binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, small ribosomal subunit, nucleolus, cell wall, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH (InterPro:IPR010979), Ribosomal protein S13, conserved site (InterPro:IPR018269), Ribosomal protein S13 (InterPro:IPR001892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S18 family (TAIR:AT1G22780.1); Has 7974 Blast hits to 7971 proteins in 2923 species: Archae - 237; Bacteria - 5081; Metazoa - 352; Fungi - 177; Plants - 401; Viruses - 0; Other Eukaryotes - 1726 (source: NCBI BLink). & (p49202|rs18_chlre : 206.0) 40S ribosomal protein S18 - Chlamydomonas reinhardtii & (reliability: 508.0) & (original description: no original description) 0.8133274305782879 18 PSME_00030912-RA (at2g39990 : 289.0) translation initiation factor eIF2 p47 subunit homolog; eukaryotic translation initiation factor 2 (EIF2); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: pollen germination, translational initiation, embryo development; LOCATED IN: eukaryotic translation initiation factor 3 complex, nucleus, membrane, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: Mov34/MPN/PAD-1 family protein (TAIR:AT3G11270.2); Has 1103 Blast hits to 1103 proteins in 237 species: Archae - 0; Bacteria - 0; Metazoa - 465; Fungi - 269; Plants - 187; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (reliability: 578.0) & (original description: no original description) 0.8059659305913723 11 PSME_00006746-RA (o82528|rl15_pethy : 315.0) 60S ribosomal protein L15 - Petunia hybrida (Petunia) & (at4g16720 : 300.0) Ribosomal protein L23/L15e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L15e (InterPro:IPR000439), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L15e, conserved site (InterPro:IPR020925); BEST Arabidopsis thaliana protein match is: Ribosomal protein L23/L15e family protein (TAIR:AT4G17390.1); Has 1382 Blast hits to 1381 proteins in 431 species: Archae - 314; Bacteria - 0; Metazoa - 409; Fungi - 163; Plants - 282; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (reliability: 600.0) & (original description: no original description) 0.7995414623747891 29 PSME_00026715-RA (at1g14980 : 139.0) Encodes mitochondrial-localized chaperonin 10 that complements the E.coli groES mutant. Its mRNA is upregulated in response to heat shock treatment and is expressed uniformly in various organs.; chaperonin 10 (CPN10); FUNCTIONS IN: copper ion binding, chaperone binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn10 (InterPro:IPR020818), GroES-like (InterPro:IPR011032), Chaperonin Cpn10, conserved site (InterPro:IPR018369), Chaperonin Cpn10, subgroup (InterPro:IPR001476); BEST Arabidopsis thaliana protein match is: GroES-like family protein (TAIR:AT1G23100.1); Has 9195 Blast hits to 9085 proteins in 2839 species: Archae - 7; Bacteria - 6160; Metazoa - 328; Fungi - 119; Plants - 343; Viruses - 2; Other Eukaryotes - 2236 (source: NCBI BLink). & (q96539|ch10_brana : 139.0) 10 kDa chaperonin (Protein CPN10) (Protein groES) - Brassica napus (Rape) & (reliability: 260.0) & (original description: no original description) 0.7915392419395294 39 PSME_00006747-RA (o82528|rl15_pethy : 315.0) 60S ribosomal protein L15 - Petunia hybrida (Petunia) & (at4g16720 : 302.0) Ribosomal protein L23/L15e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L15e (InterPro:IPR000439), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L15e, conserved site (InterPro:IPR020925); BEST Arabidopsis thaliana protein match is: Ribosomal protein L23/L15e family protein (TAIR:AT4G17390.1); Has 1382 Blast hits to 1381 proteins in 431 species: Archae - 314; Bacteria - 0; Metazoa - 409; Fungi - 163; Plants - 282; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (reliability: 604.0) & (original description: no original description) 0.7884214330218008 16 PSME_00047787-RA (at2g37250 : 273.0) encodes adenylate kinase that is located in the chloroplast involved in the coordination of metabolism and growth; adenosine kinase (ADK); CONTAINS InterPro DOMAIN/s: Adenylate kinase, subfamily (InterPro:IPR006259), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G39270.1); Has 14783 Blast hits to 14646 proteins in 5115 species: Archae - 103; Bacteria - 9935; Metazoa - 1161; Fungi - 479; Plants - 468; Viruses - 0; Other Eukaryotes - 2637 (source: NCBI BLink). & (q8hsw1|kadc_soltu : 262.0) Adenylate kinase, chloroplast precursor (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Solanum tuberosum (Potato) & (reliability: 546.0) & (original description: no original description) 0.7837253908898224 39 PSME_00018601-RA (at2g21580 : 128.0) Ribosomal protein S25 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S25 (InterPro:IPR004977); BEST Arabidopsis thaliana protein match is: Ribosomal protein S25 family protein (TAIR:AT4G39200.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 256.0) & (original description: no original description) 0.7829524409143408 95 PSME_00007401-RA (at5g35530 : 366.0) Ribosomal protein S3 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to salt stress, translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, prokaryotic type (InterPro:IPR009019), K Homology, type 2 (InterPro:IPR004044), K Homology (InterPro:IPR004087), Ribosomal protein S3, C-terminal (InterPro:IPR001351), Ribosomal protein S3, eukaryotic/archaeal (InterPro:IPR005703); BEST Arabidopsis thaliana protein match is: Ribosomal protein S3 family protein (TAIR:AT2G31610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 732.0) & (original description: no original description) 0.7808114751323995 41 PSME_00009688-RA (at3g21540 : 120.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: nucleolus, heterotrimeric G-protein complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Small-subunit processome, Utp12 (InterPro:IPR007148), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT5G16750.1); Has 119158 Blast hits to 33008 proteins in 859 species: Archae - 80; Bacteria - 11912; Metazoa - 49564; Fungi - 26721; Plants - 15098; Viruses - 0; Other Eukaryotes - 15783 (source: NCBI BLink). & (reliability: 240.0) & (original description: no original description) 0.7725868537034615 32 PSME_00000339-RA (at5g45775 : 341.0) Ribosomal L5P family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, vacuole; EXPRESSED IN: male gametophyte, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, N-terminal (InterPro:IPR020927), Ribosomal protein L5, C-terminal (InterPro:IPR020928); BEST Arabidopsis thaliana protein match is: ribosomal protein L16B (TAIR:AT4G18730.1); Has 7854 Blast hits to 7854 proteins in 2814 species: Archae - 312; Bacteria - 5083; Metazoa - 254; Fungi - 163; Plants - 278; Viruses - 0; Other Eukaryotes - 1764 (source: NCBI BLink). & (p46287|rl11_medsa : 340.0) 60S ribosomal protein L11 (L5) - Medicago sativa (Alfalfa) & (reliability: 682.0) & (original description: no original description) 0.7693095744062538 86 PSME_00037360-RA (at1g08360 : 341.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G27530.2); Has 3821 Blast hits to 3820 proteins in 1247 species: Archae - 280; Bacteria - 1757; Metazoa - 462; Fungi - 186; Plants - 511; Viruses - 0; Other Eukaryotes - 625 (source: NCBI BLink). & (q9sw75|rl10a_chlre : 255.0) 60S ribosomal protein L10a - Chlamydomonas reinhardtii & (reliability: 682.0) & (original description: no original description) 0.7673853024024362 76 PSME_00032626-RA (at3g14200 : 132.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G72416.2); Has 21914 Blast hits to 21906 proteins in 3169 species: Archae - 155; Bacteria - 8965; Metazoa - 3686; Fungi - 1997; Plants - 2132; Viruses - 13; Other Eukaryotes - 4966 (source: NCBI BLink). & (reliability: 264.0) & (original description: no original description) 0.7622615761934254 96 PSME_00037160-RA (at4g33865 : 113.0) Ribosomal protein S14p/S29e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S14 (InterPro:IPR001209); BEST Arabidopsis thaliana protein match is: Ribosomal protein S14p/S29e family protein (TAIR:AT3G43980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 226.0) & (original description: no original description) 0.7618559417574 63 PSME_00017697-RA (at1g18010 : 119.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G18000.1); Has 758 Blast hits to 750 proteins in 174 species: Archae - 0; Bacteria - 91; Metazoa - 141; Fungi - 422; Plants - 82; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 238.0) & (original description: no original description) 0.755801972051836 23 PSME_00015272-RA (at1g23750 : 183.0) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT1G10590.2); Has 249 Blast hits to 249 proteins in 61 species: Archae - 55; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 366.0) & (original description: no original description) 0.7520800202880115 63 PSME_00009756-RA (at4g22380 : 194.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to 1809 proteins in 413 species: Archae - 342; Bacteria - 16; Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). & (reliability: 386.0) & (original description: no original description) 0.750640304020206 54 PSME_00025154-RA (at1g25260 : 217.0) Ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10 (InterPro:IPR001790); BEST Arabidopsis thaliana protein match is: Ribosomal protein L10 family protein (TAIR:AT3G11250.1); Has 1099 Blast hits to 1097 proteins in 339 species: Archae - 116; Bacteria - 0; Metazoa - 360; Fungi - 259; Plants - 172; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (reliability: 434.0) & (original description: no original description) 0.7426009074766836 36 PSME_00047601-RA (at5g11260 : 153.0) Basic leucine zipper (bZIP) transcription factor. Nuclear localization. Involved in light-regulated transcriptional activation of G-box-containing promoters. Negatively regulated by Cop1. Although cytokinins do not appear to affect the gene's promoter activity, they appear to stabilize the protein. HY5 plays a role in anthocyanin accumulation in far-red light and blue light, but not in red light or in the dark. Mutant studies showed that the gene product is involved in the positive regulation of the PHYA-mediated inhibition of hypocotyl elongation. Binds to G- and Z-boxes, and other ACEs, but not to E-box. Loss of function mutation shows ABA resistant seedling phenotypes suggesting involvement for HY5 in mediating ABA responses. Binds to the promoter of ABI5 and regulates its expression.; ELONGATED HYPOCOTYL 5 (HY5); FUNCTIONS IN: double-stranded DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 13 processes; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616), cAMP response element binding (CREB) protein (InterPro:IPR001630); BEST Arabidopsis thaliana protein match is: HY5-homolog (TAIR:AT3G17609.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 306.0) & (original description: no original description) 0.7410222884340627 30 PSME_00001287-RA (at3g60550 : 212.0) cyclin p3;2 (CYCP3;2); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin-related 2 (InterPro:IPR013922); BEST Arabidopsis thaliana protein match is: cyclin p3;1 (TAIR:AT2G45080.1); Has 1360 Blast hits to 1354 proteins in 218 species: Archae - 0; Bacteria - 18; Metazoa - 236; Fungi - 630; Plants - 217; Viruses - 0; Other Eukaryotes - 259 (source: NCBI BLink). & (reliability: 424.0) & (original description: no original description) 0.7374549671708159 51 PSME_00050025-RA (at5g64020 : 456.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 14 (TBL14); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 15 (TAIR:AT2G37720.1); Has 1334 Blast hits to 1314 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1334; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 912.0) & (original description: no original description) 0.7349794058715443 44 PSME_00003001-RA (q94de2|bd31a_orysa : 231.0) Protein BUD31 homolog 1 (Protein G10 homolog 1) - Oryza sativa (Rice) & (at4g21110 : 230.0) G10 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: G10 protein (InterPro:IPR001748), BUD31/G10-related, conserved site (InterPro:IPR018230); Has 466 Blast hits to 466 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 189; Fungi - 126; Plants - 80; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 460.0) & (original description: no original description) 0.734231014694783 36 PSME_00003810-RA no hits & (original description: no original description) 0.7335331834737044 59 PSME_00047252-RA (at3g47370 : 204.0) Ribosomal protein S10p/S20e family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S10, conserved site (InterPro:IPR018268), Ribosomal protein S10, eukaryotic/archaeal (InterPro:IPR005729), Ribosomal protein S10 (InterPro:IPR001848); BEST Arabidopsis thaliana protein match is: Ribosomal protein S10p/S20e family protein (TAIR:AT5G62300.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p35686|rs20_orysa : 192.0) 40S ribosomal protein S20 - Oryza sativa (Rice) & (reliability: 408.0) & (original description: no original description) 0.7278400709371117 65 PSME_00002423-RA (at3g01800 : 286.0) Ribosome recycling factor; INVOLVED IN: translational termination, translation; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosome recycling factor, bacterial-like (InterPro:IPR015998), Ribosome recycling factor (InterPro:IPR002661); BEST Arabidopsis thaliana protein match is: ribosome recycling factor, chloroplast precursor (TAIR:AT3G63190.1); Has 7776 Blast hits to 7776 proteins in 2635 species: Archae - 0; Bacteria - 5288; Metazoa - 113; Fungi - 65; Plants - 94; Viruses - 0; Other Eukaryotes - 2216 (source: NCBI BLink). & (p82231|rrfc_spiol : 120.0) Ribosome recycling factor, chloroplast precursor (Ribosome-releasing factor, chloroplast) (RRF) (CpFrr) (RRFHCP) - Spinacia oleracea (Spinach) & (reliability: 572.0) & (original description: no original description) 0.7272816932937977 40 PSME_00015731-RA (p93847|rl10_solme : 394.0) 60S ribosomal protein L10 (EQM) - Solanum melongena (Eggplant) (Aubergine) & (at1g14320 : 384.0) Encodes a ribosomal protein L10 and may be involved in translation regulation. Semi-dominant mutations in SAC552 can suppress defects in acaulis5, which encodes a thermospermine synthase, by enhancing translation of acl5 and itself.; SUPPRESSOR OF ACAULIS 52 (SAC52); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: cellular response to UV-B, translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, plasma membrane, large ribosomal subunit; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10e (InterPro:IPR001197), Ribosomal protein L10e/L16 (InterPro:IPR016180); BEST Arabidopsis thaliana protein match is: Ribosomal protein L16p/L10e family protein (TAIR:AT1G26910.1); Has 1844 Blast hits to 1606 proteins in 584 species: Archae - 300; Bacteria - 0; Metazoa - 671; Fungi - 224; Plants - 162; Viruses - 0; Other Eukaryotes - 487 (source: NCBI BLink). & (reliability: 768.0) & (original description: no original description) 0.7250784340262708 79 PSME_00026394-RA (at5g15740 : 444.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G02250.1); Has 822 Blast hits to 815 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 822; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 880.0) & (original description: no original description) 0.7209053246932593 45 PSME_00024021-RA (at5g25757 : 703.0) RNA polymerase I-associated factor PAF67; CONTAINS InterPro DOMAIN/s: RNA polymerase I-associated factor PAF67 (InterPro:IPR019382); BEST Arabidopsis thaliana protein match is: RNA polymerase I-associated factor PAF67 (TAIR:AT5G25754.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1406.0) & (original description: no original description) 0.7183244648541708 48 PSME_00001474-RA (at3g18440 : 542.0) Belongs to the aluminum-activated malate transporter family. Encodes a vacuolar malate channel. Expressed in all parts of plants. Almost exclusively expressed in mesophyll cells of leaves.; aluminum-activated malate transporter 9 (ALMT9); CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G18420.1); Has 814 Blast hits to 808 proteins in 259 species: Archae - 0; Bacteria - 440; Metazoa - 0; Fungi - 20; Plants - 338; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 1084.0) & (original description: no original description) 0.7149371977014973 76 PSME_00022077-RA (at3g04830 : 383.0) Protein prenylyltransferase superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Protein prenylyltransferase superfamily protein (TAIR:AT5G28220.1); Has 523 Blast hits to 519 proteins in 216 species: Archae - 31; Bacteria - 43; Metazoa - 200; Fungi - 109; Plants - 58; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (reliability: 766.0) & (original description: no original description) 0.7130647212231966 66 PSME_00000345-RA (at5g60990 : 556.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase 36 (TAIR:AT1G16280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p46942|db10_nicsy : 196.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1112.0) & (original description: no original description) 0.7120455171206038 54 PSME_00006088-RA (at1g50490 : 245.0) Encodes one of two ubiquitin-conjugating enzymes belonging to the E2-C gene family (the other being UBC19). Transcript is always found in diving cells, but also in other non-dividing cells.; ubiquitin-conjugating enzyme 20 (UBC20); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme E2 H10 (InterPro:IPR015582), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme19 (TAIR:AT3G20060.1); Has 10004 Blast hits to 9989 proteins in 393 species: Archae - 0; Bacteria - 0; Metazoa - 4460; Fungi - 2092; Plants - 1828; Viruses - 23; Other Eukaryotes - 1601 (source: NCBI BLink). & (p35130|ubc2_medsa : 122.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (reliability: 490.0) & (original description: no original description) 0.7067545998146464 89 PSME_00021791-RA (at2g21270 : 385.0) ubiquitin fusion degradation 1 (UFD1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin fusion degradation protein UFD1 (InterPro:IPR004854); BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT4G38930.2); Has 705 Blast hits to 703 proteins in 222 species: Archae - 8; Bacteria - 2; Metazoa - 165; Fungi - 211; Plants - 127; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (reliability: 770.0) & (original description: no original description) 0.6902222333531611 69 PSME_00007989-RA (at3g22840 : 149.0) Encodes an early light-inducible protein.; EARLY LIGHT-INDUCABLE PROTEIN (ELIP1); BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT4G14690.1); Has 319 Blast hits to 319 proteins in 50 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 259; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (p11432|eli_pea : 149.0) Early light-induced protein, chloroplast precursor (ELIP) - Pisum sativum (Garden pea) & (reliability: 298.0) & (original description: no original description) 0.684106861457418 75 PSME_00021381-RA (at2g41000 : 119.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT3G08910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 238.0) & (original description: no original description) 0.6814487379757929 78 PSME_00001518-RA (at5g44640 : 474.0) beta glucosidase 13 (BGLU13); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 12 (TAIR:AT5G42260.1); Has 11271 Blast hits to 10941 proteins in 1459 species: Archae - 140; Bacteria - 7743; Metazoa - 717; Fungi - 200; Plants - 1456; Viruses - 0; Other Eukaryotes - 1015 (source: NCBI BLink). & (p49235|bglc_maize : 412.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 948.0) & (original description: no original description) 0.6696889681656907 90 PSME_00036870-RA no hits & (original description: no original description) 0.662623280247358 98 PSME_00004206-RA (at1g19120 : 173.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT3G14080.2); Has 1149 Blast hits to 1149 proteins in 232 species: Archae - 65; Bacteria - 0; Metazoa - 426; Fungi - 329; Plants - 203; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 346.0) & (original description: no original description) 0.6625497825834128 99 PSME_00028767-RA (q05046|ch62_cucma : 97.1) Chaperonin CPN60-2, mitochondrial precursor (HSP60-2) - Cucurbita maxima (Pumpkin) (Winter squash) & (at2g33210 : 95.9) heat shock protein 60-2 (HSP60-2); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: heat shock protein 60 (TAIR:AT3G23990.1). & (reliability: 191.8) & (original description: no original description) 0.6622964064544314 100