Sequence Description Alias PCC hrr PSME_00022181-RA (at5g55540 : 1339.0) Encodes a large plant-specific protein of unknown function, with conserved domains also found in a variety of signaling proteins, In trn mutants, the leaf venation network had a severely reduced complexity: incomplete loops, no tertiary or quaternary veins, and vascular islands. The leaf laminas were asymmetric and narrow because of a severely reduced cell number. TRN1 is required for the maintenance of both the radial pattern of tissue differentiation in the root and for the subsequent circumferential pattern within the epidermis. Double mutant analysis showed that TRN1 and TRN2 act in the same pathway.; TORNADO 1 (TRN1); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT1G10510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 2678.0) & (original description: no original description) 0.8253506999621918 20 PSME_00036002-RA (at1g67940 : 275.0) member of NAP subfamily; non-intrinsic ABC protein 3 (NAP3); FUNCTIONS IN: transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transport system permease protein 1 (InterPro:IPR005670), ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 7 (TAIR:AT5G46540.1); Has 422748 Blast hits to 381356 proteins in 3991 species: Archae - 7530; Bacteria - 326504; Metazoa - 9961; Fungi - 7250; Plants - 4967; Viruses - 18; Other Eukaryotes - 66518 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 90.5) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 550.0) & (original description: no original description) 0.792099513259551 28 PSME_00010687-RA (at2g39830 : 370.0) DA1-related protein 2 (DAR2); FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: LIM domain-containing protein (TAIR:AT4G36860.1); Has 1539 Blast hits to 1276 proteins in 109 species: Archae - 0; Bacteria - 10; Metazoa - 1178; Fungi - 26; Plants - 170; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (reliability: 740.0) & (original description: no original description) 0.7913498440132652 8 PSME_00055924-RA (at5g47750 : 588.0) D6 protein kinase like 2 (D6PKL2); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleolus, nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 1 (TAIR:AT4G26610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p15792|kpk1_phavu : 553.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1176.0) & (original description: no original description) 0.7796447454230462 51 PSME_00029576-RA (at2g47160 : 1022.0) Boron transporter. Protein accumulates in shoots and roots under conditions of boron deficiency and is degraded within several hours of restoring boron supply. Localized to the plasma membrane under B limitation, and to the cytoplasm after B application before degradation. Protein is transferred via the endosomes to the vacuole for degradation. Localized to the inner plasma membrane domain in the columella, lateral root cap, epidermis, and endodermis in the root tip region, and in the epidermis and endodermis in the elongation zone. Under high-boron is transported to the vacuole for degradation.; REQUIRES HIGH BORON 1 (BOR1); CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, eukaryotic (InterPro:IPR003020), Bicarbonate transporter, C-terminal (InterPro:IPR011531); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT3G62270.1); Has 2632 Blast hits to 1400 proteins in 192 species: Archae - 0; Bacteria - 6; Metazoa - 1971; Fungi - 316; Plants - 233; Viruses - 2; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 2044.0) & (original description: no original description) 0.7753005152295206 64 PSME_00029841-RA (at5g41460 : 466.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G23490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 932.0) & (original description: no original description) 0.7697517496283263 72 PSME_00004546-RA (at1g75290 : 279.0) encodes a protein whose sequence is similar to an isoflavone reductase; NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sepal, male gametophyte, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 2800 Blast hits to 2796 proteins in 694 species: Archae - 20; Bacteria - 1285; Metazoa - 16; Fungi - 637; Plants - 615; Viruses - 7; Other Eukaryotes - 220 (source: NCBI BLink). & (p52579|ifrh_tobac : 278.0) Isoflavone reductase homolog A622 (EC 1.3.1.-) - Nicotiana tabacum (Common tobacco) & (reliability: 558.0) & (original description: no original description) 0.7657206004623925 60 PSME_00054309-RA (at3g57880 : 953.0) Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: endoplasmic reticulum, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein (TAIR:AT1G51570.1); Has 5845 Blast hits to 4237 proteins in 266 species: Archae - 0; Bacteria - 0; Metazoa - 3557; Fungi - 274; Plants - 1573; Viruses - 0; Other Eukaryotes - 441 (source: NCBI BLink). & (reliability: 1756.0) & (original description: no original description) 0.761710454838424 73 PSME_00023171-RA (at1g42540 : 500.0) member of Putative ligand-gated ion channel subunit family; glutamate receptor 3.3 (GLR3.3); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), GPCR, family 3, gamma-aminobutyric acid receptor, type B (InterPro:IPR002455), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 3.6 (TAIR:AT3G51480.1); Has 6567 Blast hits to 6430 proteins in 489 species: Archae - 28; Bacteria - 758; Metazoa - 4571; Fungi - 0; Plants - 644; Viruses - 2; Other Eukaryotes - 564 (source: NCBI BLink). & (q7xp59|glr31_orysa : 487.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (reliability: 1000.0) & (original description: no original description) 0.7560367440120515 96 PSME_00047728-RA (at1g23000 : 103.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT3G06130.1); Has 2286 Blast hits to 2008 proteins in 133 species: Archae - 0; Bacteria - 60; Metazoa - 111; Fungi - 41; Plants - 1285; Viruses - 0; Other Eukaryotes - 789 (source: NCBI BLink). & (reliability: 202.0) & (original description: no original description) 0.748281388968294 75 PSME_00038285-RA (at5g46040 : 105.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 3 (TAIR:AT5G46050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 210.0) & (original description: no original description) 0.7481766407587629 55 PSME_00039747-RA (at1g68920 : 174.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: cryptochrome-interacting basic-helix-loop-helix 5 (TAIR:AT1G26260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 348.0) & (original description: no original description) 0.7461750945803063 58 PSME_00033282-RA (at1g68810 : 191.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix 32 (TAIR:AT3G25710.1); Has 3080 Blast hits to 3073 proteins in 197 species: Archae - 0; Bacteria - 9; Metazoa - 353; Fungi - 47; Plants - 2657; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 382.0) & (original description: no original description) 0.7444837974945594 96 PSME_00005252-RA (at5g67360 : 706.0) Encodes a subtilisin-like serine protease essential for mucilage release from seed coats.; ARA12; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, seed coat development, mucilage metabolic process involved seed coat development, mucilage extrusion from seed coat; LOCATED IN: extracellular region, apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1412.0) & (original description: no original description) 0.7404129590256838 63 PSME_00048584-RA (at4g29920 : 421.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: protein metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Clp amino terminal domain-containing protein (TAIR:AT5G57130.1); Has 2205 Blast hits to 2155 proteins in 769 species: Archae - 7; Bacteria - 1557; Metazoa - 28; Fungi - 31; Plants - 337; Viruses - 0; Other Eukaryotes - 245 (source: NCBI BLink). & (q6f2y7|hs101_orysa : 90.5) Heat shock protein 101 - Oryza sativa (Rice) & (reliability: 842.0) & (original description: no original description) 0.7370899854524645 67 PSME_00038103-RA (at4g32300 : 398.0) S-domain-2 5 (SD2-5); FUNCTIONS IN: carbohydrate binding, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid autophosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT5G35370.1); Has 119450 Blast hits to 117822 proteins in 4317 species: Archae - 101; Bacteria - 12813; Metazoa - 43689; Fungi - 10139; Plants - 34770; Viruses - 395; Other Eukaryotes - 17543 (source: NCBI BLink). & (p17801|kpro_maize : 234.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 796.0) & (original description: no original description) 0.7353252054219649 92 PSME_00056448-RA (at2g36770 : 254.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 7907 Blast hits to 7812 proteins in 435 species: Archae - 0; Bacteria - 273; Metazoa - 2293; Fungi - 33; Plants - 5130; Viruses - 108; Other Eukaryotes - 70 (source: NCBI BLink). & (p56725|zox_phavu : 196.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 492.0) & (original description: no original description) 0.7348575190680414 74 PSME_00026867-RA (at4g21310 : 166.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT2G32280.1); Has 141 Blast hits to 141 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 332.0) & (original description: no original description) 0.7325291794410898 85