Sequence Description Alias PCC hrr Solyc03g063220 RNA helicase DEAH-box8 0.9936919008324046 1 Solyc05g013200 Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9HY03_POPTR) 0.9914774764670715 2 Solyc04g082870 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103IBH5_CYNCS) 0.9905968917534833 3 Solyc12g042400 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A199UJF3_ANACO) 0.9883230151144894 7 Solyc04g072570 Receptor-like kinase (AHRD V3.3 *** A0A0K9PIY0_ZOSMR) 0.988152297610897 5 Solyc12g009940 Glycosyltransferase (AHRD V3.3 *** K4DC82_SOLLC) 0.9879717243379618 6 Solyc06g065680 cyclin A2 0.9878069919445689 10 Solyc01g087390 0.987062712392105 8 Solyc11g006940 Pentatricopeptide repeat superfamily protein (AHRD V3.3 *** A0A061ETI9_THECC) 0.9866968148779517 11 Solyc04g005550 Disease resistance protein (NBS-LRR class) family (AHRD V3.3 *-* AT5G40060.1) 0.9865688679068197 10 Solyc08g008020 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (AHRD V3.3 *** AT4G11610.2) 0.9859995928531403 11 Solyc12g011400 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103XLX2_CYNCS) 0.9851481994622671 17 Solyc12g039180 Diacylglycerol kinase (AHRD V3.3 *** K4DER4_SOLLC) 0.9846231456739047 13 Solyc02g084240 H1 histone-like protein 0.9827345357637726 14 Solyc06g034390 Phosphate-responsive 1 family protein (AHRD V3.3 *** G7JP91_MEDTR) 0.9823201847743505 33 Solyc02g087640 NADH dehydrogenase ubiquinone complex I, assembly factor-like protein (DUF185) (AHRD V3.3 *** AT3G28700.1) 0.9817505539108058 36 Solyc09g008460 Ras-related gtp-binding protein (AHRD V3.3 *** C1E029_MICCC) 0.9816933549551359 26 Solyc10g006490 Trafficking protein particle complex subunit 3 (AHRD V3.3 *** A0A1D1YVK5_9ARAE) 0.9815914846996884 18 Solyc06g071200 Transportin-3 (AHRD V3.3 *** A0A0B2QFE0_GLYSO) 0.9813781333409924 21 Solyc03g093260 Structural maintenance of chromosomes protein (AHRD V3.3 *** A0A072TZX1_MEDTR) 0.9812124438437956 43 Solyc01g099530 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103XQU8_CYNCS) 0.9811879803937766 21 Solyc11g072640 Polyketide synthase, enoylreductase family protein isoform 2 (AHRD V3.3 *-* A0A061GYF8_THECC) 0.9811592256561962 22 Solyc12g014490 Microtubule associated family protein (AHRD V3.3 *** B9GJD5_POPTR) 0.9808980088680648 35 Solyc01g014490 DNA topoisomerase 6 subunit B (AHRD V3.3 *** K4AU86_SOLLC) 0.9807189207944285 24 Solyc02g084660 Glutaredoxin (AHRD V3.3 *-* A0A124SH95_CYNCS) 0.9798064116003933 25 Solyc01g105710 peptidyl-prolyl isomerase FKBP12 0.9795003640269423 26 Solyc08g080680 Calcium-dependent lipid-binding domain-containing protein (AHRD V3.3 *** A0A0K9PV75_ZOSMR) 0.9790310351125954 28 Solyc02g077480 Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.9789301053136256 53 Solyc05g053800 DNA repair protein RAD50 (AHRD V3.3 *** RAD50_ARATH) 0.9787135464823917 44 Solyc10g008910 Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.9785774435845553 58 Solyc03g118790 Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9SU85_RICCO) 0.9785107617843662 72 Solyc11g010950 Elongator complex 4 (AHRD V3.3 *** A0A0B0P040_GOSAR) 0.9783381711203644 32 Solyc03g083210 Defective in meristem silencing 3 (AHRD V3.3 *** A0A061G2F1_THECC) 0.9782600040442448 33 Solyc03g007100 Cleavage and polyadenylation specificity factor subunit 1 (AHRD V3.3 *** W9SC01_9ROSA) 0.9781534264408892 36 Solyc01g081560 LOW QUALITY:Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A199UML1_ANACO) 0.977836452937045 35 Solyc10g047000 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT1G80670.1) 0.9777476981140907 36 Solyc01g081240 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103Y130_CYNCS) 0.977709341788882 58 Solyc03g117510 Formamidopyrimidine-DNA glycosylase, putative (AHRD V3.3 *** B9RVA4_RICCO) 0.9775998007756519 49 Solyc07g045010 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, putative isoform 1 (AHRD V3.3 *** A0A061DKZ1_THECC) 0.9774471114630943 50 Solyc03g071620 Histone H2B (AHRD V3.3 *** K4BHJ2_SOLLC) 0.9773271650250825 48 Solyc01g009620 Cleavage and polyadenylation specificity factor subunit 5 (AHRD V3.3 *** A0A0K9P6H8_ZOSMR) 0.977243343750549 41 Solyc09g042710 weak chloroplast movement under blue light protein (DUF827) (AHRD V3.3 *** AT2G38370.2) 0.9770804948931952 42 Solyc02g094310 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A0B2R834_GLYSO) 0.9770643099843713 43 Solyc08g066010 Tetratricopeptide repeat-like superfamily protein isoform 1 (AHRD V3.3 *** A0A061GK97_THECC) 0.9770633749492136 44 Solyc03g110880 RNA polymerase 4 second largest subunit (RPD2) 0.9767544628328156 45 Solyc06g071330 Nucleobase-ascorbate transporter-like protein (AHRD V3.3 *** A0A072VA43_MEDTR) 0.976512526759746 46 Solyc04g009220 Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9T720_RICCO) 0.9764257373522758 47 Solyc03g063340 DNA polymerase delta small subunit (AHRD V3.3 *** AT2G42120.2) 0.9763590612160676 48 Solyc01g091230 Receptor-like kinase (AHRD V3.3 *** A0A191UPW4_CASSA) 0.9762579143421678 50 Solyc02g087980 Structural maintenance of chromosomes protein (AHRD V3.3 *** K4BBV4_SOLLC) 0.976131616149447 80 Solyc01g099310 cyclinH1_1 0.9761102989514802 51 Solyc12g019860 CCR4-NOT transcription complex subunit 3 (AHRD V3.3 *** W9RL65_9ROSA) 0.9760115348322927 52 Solyc10g012060 Mechanosensitive ion channel protein (AHRD V3.3 *** AT4G00290.1) 0.9756395376640684 85 Solyc03g007350 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A061EH92_THECC) 0.9755062139350987 54 Solyc04g007890 HMG-Y-related protein A (AHRD V3.3 *** HMGYA_ARATH) 0.9754130164616933 83 Solyc03g031670 calcium-dependent protein kinase 0.9752973741484344 56 Solyc01g087490 Peptidyl-prolyl cis-trans isomerase FKBP42 (AHRD V3.3 *-* A0A0B2RKD3_GLYSO) 0.9752091011484546 57 Solyc01g109610 Erythronate-4-phosphate dehydrogenase family protein (AHRD V3.3 *** G7JG61_MEDTR) 0.9749716138052769 58 Solyc04g064750 Pentatricopeptide repeat superfamily protein (AHRD V3.3 *** A0A061FHU2_THECC) 0.9746337109694031 68 Solyc12g035360 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT5G14530.1) 0.9745816812426294 60 Solyc10g008440 expansin B3 (AHRD V3.3 *** AT4G28250.1) 0.9744441785982285 61 Solyc02g092980 cyclin D3.1 0.9740476161173812 62 Solyc10g079730 Condensin complex subunit 1 (AHRD V3.3 *** K4D2L4_SOLLC) 0.9739912756896824 94 Solyc03g032180 Poly(A) polymerase, putative (AHRD V3.3 *** B9S6T6_RICCO) 0.9738304147947833 64 Solyc10g076600 Acyl-coenzyme A oxidase 4 (AHRD V3.3 *** W9RND6_9ROSA) 0.9736513184681364 65 Solyc09g008030 TCP transcription factor 19 0.9736250475290917 71 Solyc06g005420 histone H4 (AHRD V3.3 *** AT2G28740.1) 0.973213438203686 67 Solyc07g025390 Peptidyl-prolyl cis-trans isomerase-like 3 (AHRD V3.3 *-* A0A0B2PVH2_GLYSO) 0.9731652133496517 68 Solyc01g080070 Heavy metal transport/detoxification superfamily protein (AHRD V3.3 *-* AT3G06130.1) 0.97313050172431 69 Solyc01g006370 Callose synthase (AHRD V3.3 *** K7PRK8_MAIZE) 0.9731287185561908 70 Solyc11g073260 Histone H2A (AHRD V3.3 *** K4DB32_SOLLC) 0.9730943341267393 75 Solyc02g090620 Sulfotransferase (AHRD V3.3 *** K4BCL1_SOLLC) 0.973075380472908 72 Solyc06g066380 LOW QUALITY:Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RE94_RICCO) 0.9729988252550907 73 Solyc01g101110 Serine/threonine-protein kinase haspin (AHRD V3.3 *** A0A146F677_TOBAC) 0.9729098324087787 74 Solyc11g073250 Histone H2A (AHRD V3.3 *** K4DB31_SOLLC) 0.9728118269804897 100 Solyc05g046280 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103XBJ8_CYNCS) 0.9723994072040597 96 Solyc01g103340 Zinc finger CCCH domain-containing protein 44 (AHRD V3.3 *-* W9SKR1_9ROSA) 0.9723739149760059 77 Solyc12g010740 Leucine-rich repeat receptor-like protein kinase (AHRD V3.3 *-* C0LGQ2_ARATH) 0.972051067386297 79 Solyc08g014100 Pentatricopeptide repeat superfamily protein (AHRD V3.3 *** A0A061EU55_THECC) 0.9717544154931933 85 Solyc01g112070 O-fucosyltransferase family protein (AHRD V3.3 *** AT1G20550.1) 0.9716296672452409 81 Solyc06g060050 Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9IK16_POPTR) 0.9715572642263874 82 Solyc10g083310 Kinesin-related protein (AHRD V3.3 *** A0A0B0NF68_GOSAR) 0.9715152372659587 90 Solyc09g075830 Protein TIME FOR COFFEE-like protein (AHRD V3.3 *** A0A0B0MVU7_GOSAR) 0.971485106387489 84 Solyc01g100010 F-box protein (AHRD V3.3 *** W9RMP6_9ROSA) 0.9714210501628033 85 Solyc01g111840 Major facilitator superfamily protein (AHRD V3.3 *** AT5G42210.2) 0.9713119659799816 86 Solyc12g014000 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A118K6D3_CYNCS) 0.9712159306000968 87 Solyc01g010710 Carboxypeptidase (AHRD V3.3 *-* K4ATR4_SOLLC) 0.9708738247398727 88 Solyc10g078740 Enoyl reductase (AHRD V3.3 *** P93062_BRANA) 0.9707637459451879 89 Solyc02g084830 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103YGR3_CYNCS) 0.970729593197556 90 Solyc11g072860 histone H4 (AHRD V3.3 *** AT2G28740.1) 0.9705959639449682 92 Solyc01g095160 Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** AT4G37170.1) 0.9705293331419691 94 Solyc09g075170 Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** AT3G62890.1) 0.9705212261407306 95 Solyc01g007060 BTB/POZ domain-containing protein (AHRD V3.3 *** AT3G05675.3) 0.9704127503843895 96 Solyc01g066830 Ubiquitin-like-specific protease ESD4 (AHRD V3.3 *** A0A0B0MXS6_GOSAR) 0.9702242146025207 99 Solyc06g083100 HAUS augmin-like complex subunit (AHRD V3.3 *** AT5G48520.1) 0.970163226338191 100