Sequence Description Alias PCC hrr Solyc06g005420 histone H4 (AHRD V3.3 *** AT2G28740.1) 0.9937397878394741 1 Solyc12g019860 CCR4-NOT transcription complex subunit 3 (AHRD V3.3 *** W9RL65_9ROSA) 0.9898244011766691 2 Solyc07g045170 Cytochrome P450 (AHRD V3.3 *** A0A0B0NAE7_GOSAR) 0.9875118447465174 5 Solyc01g102540 hpoxia-induced protein 242 0.9864932708319617 15 Solyc06g034390 Phosphate-responsive 1 family protein (AHRD V3.3 *** G7JP91_MEDTR) 0.9863172814141095 19 Solyc03g110880 RNA polymerase 4 second largest subunit (RPD2) 0.9854709059444958 6 Solyc08g074740 Poly [ADP-ribose] polymerase (AHRD V3.3 *** K4CMJ2_SOLLC) 0.9851790343318204 7 Solyc11g020780 dCK/dGK-like deoxyribonucleoside kinase 0.9845496566804645 10 Solyc01g009620 Cleavage and polyadenylation specificity factor subunit 5 (AHRD V3.3 *** A0A0K9P6H8_ZOSMR) 0.9841511995701223 9 Solyc03g031460 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103XF40_CYNCS) 0.9840264896089401 12 Solyc06g007780 Nuclear transport factor 2 family protein with RNA binding domain, putative isoform 2 (AHRD V3.3 *** A0A061DMC0_THECC) 0.9835917699427967 11 Solyc09g008030 TCP transcription factor 19 0.9834250551527921 15 Solyc09g007340 Serine/threonine-protein kinase ATM (AHRD V3.3 *** A0A0B0N3M2_GOSAR) 0.9832654492462027 30 Solyc06g009800 Pentatricopeptide repeat-containing protein family (AHRD V3.3 *-* A0A151SLA5_CAJCA) 0.9832324944875097 23 Solyc06g065680 cyclin A2 0.9832099618207835 21 Solyc02g086600 polyribonucleotide nucleotidyltransferase (AHRD V3.3 *** AT5G14580.1) 0.9827516114653704 16 Solyc01g104640 P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT4G15570.3) 0.9824501462307322 17 Solyc06g071200 Transportin-3 (AHRD V3.3 *** A0A0B2QFE0_GLYSO) 0.9820573955745401 18 Solyc04g005550 Disease resistance protein (NBS-LRR class) family (AHRD V3.3 *-* AT5G40060.1) 0.9818934196763845 20 Solyc06g062850 PHD finger alfin-like protein (AHRD V3.3 *** A0A072V846_MEDTR) 0.9817197136397179 20 Solyc11g073260 Histone H2A (AHRD V3.3 *** K4DB32_SOLLC) 0.9817168055608078 34 Solyc01g087390 0.9815029591280587 22 Solyc02g088170 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103XL04_CYNCS) 0.9797257129360141 23 Solyc09g005140 Zn-dependent exopeptidases superfamily protein (AHRD V3.3 --* AT1G67420.6) 0.9796109580431239 24 Solyc01g006700 Protein downstream neighbor of Son (AHRD V3.3 *** A0A0B0NFM1_GOSAR) 0.9793933757938572 25 Solyc04g071660 U-box domain-containing protein kinase family protein (AHRD V3.3 --* AT2G45910.2) 0.979371042781834 77 Solyc01g010710 Carboxypeptidase (AHRD V3.3 *-* K4ATR4_SOLLC) 0.979175829434948 27 Solyc04g014850 structural maintenance of chromosomes protein (AHRD V3.3 *** AT4G17240.1) 0.9790742842387965 28 Solyc02g087640 NADH dehydrogenase ubiquinone complex I, assembly factor-like protein (DUF185) (AHRD V3.3 *** AT3G28700.1) 0.9790741014248764 60 Solyc05g051520 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** AT2G22400.1) 0.979001928969804 30 Solyc10g079730 Condensin complex subunit 1 (AHRD V3.3 *** K4D2L4_SOLLC) 0.9786907757696806 67 Solyc04g007890 HMG-Y-related protein A (AHRD V3.3 *** HMGYA_ARATH) 0.9786328905951736 67 Solyc12g049410 nuclear pore complex protein (AHRD V3.3 *** AT3G14120.2) 0.978452462148341 35 Solyc05g013200 Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9HY03_POPTR) 0.9783322561875307 34 Solyc09g058990 translocon at the outer envelope membrane of chloroplasts 159 (AHRD V3.3 --* AT4G02510.4) 0.9781544812856923 35 Solyc03g006840 LOW protein: M-phase inducer phosphatase-like protein (AHRD V3.3 *** AT5G62170.1) 0.9781534264408892 36 Solyc02g087730 F-box family protein (AHRD V3.3 *** A0A061EFG6_THECC) 0.978096293788341 37 Solyc01g090240 AvrPto-dependent Pto-interacting protein 3 0.9780454933189537 38 Solyc05g053800 DNA repair protein RAD50 (AHRD V3.3 *** RAD50_ARATH) 0.9777369359111608 48 Solyc03g063220 RNA helicase DEAH-box8 0.9775937722140297 40 Solyc06g066380 LOW QUALITY:Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RE94_RICCO) 0.9775374019704993 41 Solyc04g076290 O-fucosyltransferase family protein (AHRD V3.3 *** AT4G24530.1) 0.9774626413899109 42 Solyc08g076020 COBW domain-containing protein 2 (AHRD V3.3 *** A0A1D1YXT1_9ARAE) 0.9773753269951108 43 Solyc10g012060 Mechanosensitive ion channel protein (AHRD V3.3 *** AT4G00290.1) 0.9773361980975361 68 Solyc08g066490 Receptor protein kinase CLAVATA1, putative (AHRD V3.3 *** B9RRZ6_RICCO) 0.9772945771131637 45 Solyc09g008460 Ras-related gtp-binding protein (AHRD V3.3 *** C1E029_MICCC) 0.9770754172979899 46 Solyc06g082850 High mobility group B 6-like protein (AHRD V3.3 *-* A0A0B0N3I4_GOSAR) 0.977052586628191 47 Solyc11g006940 Pentatricopeptide repeat superfamily protein (AHRD V3.3 *** A0A061ETI9_THECC) 0.9769866508500944 48 Solyc06g009680 BRCT domain-containing protein (AHRD V3.3 *** A0A124SIE7_CYNCS) 0.976845445011236 49 Solyc09g056170 Fimbrin, putative (AHRD V3.3 *** B9SMN8_RICCO) 0.9767367598522233 54 Solyc03g118790 Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9SU85_RICCO) 0.9766900730431805 89 Solyc01g100010 F-box protein (AHRD V3.3 *** W9RMP6_9ROSA) 0.9766667183028949 52 Solyc03g093250 Structural maintenance of chromosomes protein (AHRD V3.3 *** A0A068V0V7_COFCA) 0.9766151184086078 70 Solyc03g093260 Structural maintenance of chromosomes protein (AHRD V3.3 *** A0A072TZX1_MEDTR) 0.9763366212011733 73 Solyc01g080720 Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** A0A061ENU5_THECC) 0.9762263602499889 55 Solyc02g085230 Nucleolar 6 (AHRD V3.3 *** A0A0B0N3X3_GOSAR) 0.9760652437479549 56 Solyc01g095160 Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** AT4G37170.1) 0.9760563810843743 57 Solyc12g042400 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A199UJF3_ANACO) 0.9760149380454664 58 Solyc02g065560 Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9R8H7_RICCO) 0.9760111020957694 59 Solyc02g084510 Zinc finger CCCH domain-containing protein 44 (AHRD V3.3 *-* W9SN42_9ROSA) 0.9760020535515763 60 Solyc01g112020 Pentatricopeptide repeat superfamily protein (AHRD V3.3 *** A0A0G2T442_9ROSI) 0.9759961212871531 61 Solyc01g014490 DNA topoisomerase 6 subunit B (AHRD V3.3 *** K4AU86_SOLLC) 0.9759470567159534 62 Solyc05g018520 NADH-cytochrome b5 reductase (AHRD V3.3 *** K4BZA6_SOLLC) 0.9756940718229894 63 Solyc12g015740 Transmembrane emp24 domain-containing protein (AHRD V3.3 *** A0A1D1Z3N9_9ARAE) 0.9756886941846488 64 Solyc02g087980 Structural maintenance of chromosomes protein (AHRD V3.3 *** K4BBV4_SOLLC) 0.9756805821319178 86 Solyc10g078860 DNA-directed RNA polymerase subunit beta (AHRD V3.3 *** K4D2C7_SOLLC) 0.9756648768478448 66 Solyc01g102550 Nuclear pore complex protein Nup160 (AHRD V3.3 *-* A0A0B2S403_GLYSO),Pfam:PF11715 0.9756580612334981 67 Solyc08g077690 Chromatin remodeling 31, putative (AHRD V3.3 *** A0A061FRH7_THECC) 0.9755000773914762 68 Solyc03g117010 Sister chromatid cohesion protein PDS5 like B-B (AHRD V3.3 *-* A0A0B2PCJ8_GLYSO) 0.9753607175954904 69 Solyc03g032180 Poly(A) polymerase, putative (AHRD V3.3 *** B9S6T6_RICCO) 0.9753466359565806 70 Solyc11g066430 histone H2B 0.9752266808510771 88 Solyc01g095480 Exosome complex exonuclease RRP41, putative (AHRD V3.3 *** B9SWZ0_RICCO) 0.9750529061291817 72 Solyc12g005250 Kinesin-like protein (AHRD V3.3 *** K4DB63_SOLLC) 0.9749799977928433 89 Solyc01g081240 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103Y130_CYNCS) 0.9749612311464421 82 Solyc01g101110 Serine/threonine-protein kinase haspin (AHRD V3.3 *** A0A146F677_TOBAC) 0.9749570723210195 75 Solyc07g052700 AGAMOUS-like MADS-box transcription factor (AHRD V3.3 *** B2ZX81_CRYJA) 0.9748054191473277 76 Solyc03g005470 HR-like lesion-inducing protein-like protein (AHRD V3.3 *** AT4G14420.1) 0.9747941994448883 77 Solyc07g045010 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, putative isoform 1 (AHRD V3.3 *** A0A061DKZ1_THECC) 0.9747365771093383 78 Solyc01g081030 SCAI-like protein (AHRD V3.3 *** A0A0M4KE35_SOLTU) 0.9745903300857947 79 Solyc03g046470 O-fucosyltransferase family protein (AHRD V3.3 *** AT3G30300.2) 0.9745487956140981 80 Solyc11g011370 Condensin complex subunit 3 (AHRD V3.3 *** A0A0B0N462_GOSAR) 0.9745371887030523 95 Solyc03g121500 Myosin-like protein (AHRD V3.3 *** G7ZWG9_MEDTR) 0.9742797119888108 82 Solyc04g079750 Lipoate-protein ligase B, putative (AHRD V3.3 *** B9SUW2_RICCO) 0.9742725357883363 83 Solyc12g011400 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103XLX2_CYNCS) 0.9742616935065698 84 Solyc08g075950 Growth-regulating factor (AHRD V3.3 *** A0A072TW62_MEDTR) 0.9741309440732858 85 Solyc03g025890 DNA mismatch repair protein (AHRD V3.3 *** Q6DQL5_PETHY) 0.9741235016005604 86 Solyc03g117510 Formamidopyrimidine-DNA glycosylase, putative (AHRD V3.3 *** B9RVA4_RICCO) 0.9740510171399328 87 Solyc12g014490 Microtubule associated family protein (AHRD V3.3 *** B9GJD5_POPTR) 0.9739431762296282 88 Solyc05g013740 Coilin-like protein (AHRD V3.3 *-* U6BQ51_NICBE) 0.9739066153334357 89 Solyc11g007780 SEC12-like protein 1 (AHRD V3.3 *** A0A0B2S0C4_GLYSO) 0.9738232197581014 90 Solyc02g077480 Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.9736703033718397 91 Solyc10g083310 Kinesin-related protein (AHRD V3.3 *** A0A0B0NF68_GOSAR) 0.9736097746605048 92 Solyc02g084730 rRNA adenine N(6)-methyltransferase (AHRD V3.3 *** K4BAY8_SOLLC) 0.973541501914551 93 Solyc03g063340 DNA polymerase delta small subunit (AHRD V3.3 *** AT2G42120.2) 0.9734626006365319 94 Solyc09g025240 ENTH/VHS/ANTH family protein 0.9734456825591952 95 Solyc04g008030 Cleavage and polyadenylation specificity factor, putative (AHRD V3.3 *** B9SJ31_RICCO) 0.9733783678617929 96 Solyc10g006490 Trafficking protein particle complex subunit 3 (AHRD V3.3 *** A0A1D1YVK5_9ARAE) 0.9733329535963043 97 Solyc01g081560 LOW QUALITY:Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A199UML1_ANACO) 0.9732805373777715 98 Solyc07g008460 Histone-lysine N-methyltransferase (AHRD V3.3 *** A0A0K9P7Y1_ZOSMR) 0.9731867882224485 99 Solyc11g072860 histone H4 (AHRD V3.3 *** AT2G28740.1) 0.9731564006068097 100