Sequence Description Alias PCC hrr Solyc07g025380 DNA ligase-like protein (AHRD V3.3 *-* AT1G75150.2) 0.9927093719199617 1 Solyc04g008820 High mobility group protein (AHRD V3.3 *-* O49948_SOLTU) 0.9917573698929734 2 Solyc02g094160 Ribonucleoside-diphosphate reductase small chain (AHRD V3.3 *** RIR2_TOBAC) 0.990398574753912 3 Solyc06g072240 histone H4 (AHRD V3.3 *** AT2G28740.1) 0.9890181194902572 4 Solyc03g119990 Alpha/beta hydrolase-like (AHRD V3.3 *** A0A0K9P0U5_ZOSMR) 0.9877434044137934 5 Solyc11g066650 Kinase family protein (AHRD V3.3 *** B9MYL8_POPTR) 0.985892813788396 6 Solyc11g066790 Helicase protein with RING/U-box domain-containing protein (AHRD V3.3 *** AT5G43530.1) 0.985684921870491 7 Solyc03g122360 Cytochrome P450 (AHRD V3.3 *** Q0PNH1_CAPCH) 0.9849263815092539 8 Solyc08g023280 RING/U-box superfamily protein (AHRD V3.3 --* AT3G07200.3) 0.983669152128735 9 Solyc01g096450 Aspartic proteinase nepenthesin-1-like protein (AHRD V3.3 *** T2DNA5_PHAVU) 0.9836521415921791 10 Solyc01g105270 LeTH2tobamovirus multiplication 1 homolog 2 0.9818949417563237 11 Solyc09g091070 Malate dehydrogenase (AHRD V3.3 *** A0A061G4A3_THECC) 0.9817672087512365 12 Solyc01g094580 Beta-amylase (AHRD V3.3 *** K4AZJ9_SOLLC) 0.9814670073822805 13 Solyc08g079260 Tetratricopeptide repeat-containing family protein (AHRD V3.3 *** U5GMD7_POPTR) 0.9810386877861266 14 Solyc11g064790 signal peptide peptidase (AHRD V3.3 *** AT2G03120.1) 0.9809844835069359 15 Solyc12g008750 Splicing factor U2af large subunit B (AHRD V3.3 *** A0A0M9UMX0_NICAT) 0.9804312320926699 16 Solyc01g100030 deoxyuridine triphosphatase 0.978849525484568 17 Solyc10g008320 LOW QUALITY:phosphatidic acid phosphatase 1 (AHRD V3.3 --* AT2G01180.6) 0.9781075613362783 18 Solyc08g076190 Dimerizations, putative (AHRD V3.3 *** A0A061GE03_THECC) 0.9780554219603832 19 Solyc11g008590 Nucleotide-sugar transporter family protein (AHRD V3.3 *** AT4G35335.1) 0.9766913507942377 20 Solyc09g011820 DNA double-strand break repair rad50 ATPase, putative isoform 1 (AHRD V3.3 *** A0A061EYI5_THECC) 0.9755151403363508 21 Solyc10g081250 DNA polymerase (AHRD V3.3 *** K4D312_SOLLC) 0.9740102498299613 22 Solyc03g111350 Deoxycytidylate deaminase (AHRD V3.3 *** A0A0B2RRI8_GLYSO) 0.9725981472033991 23 Solyc07g061760 Ankyrin repeat-containing-like protein (AHRD V3.3 *** A0A061FUD1_THECC) 0.9724286730053997 24 Solyc02g050200 Breast cancer type 2 susceptibility-like protein (AHRD V3.3 *** W9RBD4_9ROSA) 0.972401139511775 25 Solyc11g006860 Ribonuclease (AHRD V3.3 *** K4D4U7_SOLLC) 0.9722826921727602 26 Solyc06g060860 ATP-dependent caseinolytic protease/crotonase family protein (AHRD V3.3 *** A0A061G4B1_THECC) 0.972205233838781 27 Solyc09g082500 Tesmin/TSO1-like CXC domain protein (AHRD V3.3 *** G7K3P9_MEDTR) 0.9710639258374375 46 Solyc02g084960 LOW QUALITY:Transmembrane protein, putative (AHRD V3.3 *** A0A072TTD0_MEDTR) 0.9710243815662236 29 Solyc03g115050 Replication A 70 kDa DNA-binding subunit (AHRD V3.3 *** A0A0B0N129_GOSAR) 0.9709246809204061 30 Solyc01g088390 Sister chromatid cohesion protein DCC1 (AHRD V3.3 *** A0A072TGP8_MEDTR) 0.9702947468664086 31 Solyc05g014690 RNA helicase DEAH-box14 0.9698293459911836 32 Solyc09g009140 Gamma-tubulin complex component (AHRD V3.3 *** K4CQU3_SOLLC) 0.9688249369640191 37 Solyc09g007330 minichromosome maintenance 8 (AHRD V3.3 *** AT3G09660.3) 0.968469836431767 34 Solyc07g053950 DNA-directed RNA polymerase subunit alpha (AHRD V3.3 --* A0A0K1ZCQ4_9ASTE) 0.968254208118958 35 Solyc10g081830 Replication protein A subunit (AHRD V3.3 *** A0A1D1Z493_9ARAE) 0.9675961486584491 36 Solyc06g072660 Protein DEK (AHRD V3.3 *** A0A0B2QBX5_GLYSO) 0.9675582797327501 37 Solyc08g076910 Ubiquitin carboxyl-terminal hydrolase-like protein (AHRD V3.3 *** G7KF27_MEDTR) 0.9674060847437845 38 Solyc08g077990 Kinase like protein (AHRD V3.3 *-* Q0WPK0_ARATH) 0.9670228522806379 39 Solyc03g117020 Stromal cell-derived factor 2-like protein (AHRD V3.3 *** SDF2_ARATH) 0.966513644972446 40 Solyc03g114690 WD-repeat protein, putative (AHRD V3.3 *** B9RVD7_RICCO) 0.9664023532709392 41 Solyc02g082700 High mobility group protein (AHRD V3.3 *** O49948_SOLTU) 0.9658643822140386 58 Solyc11g005690 TONSOKU protein (AHRD V3.3 *** Q4W7J1_TOBAC) 0.9650752612673144 43 Solyc04g017650 PAX-interacting protein 1 (AHRD V3.3 *** W9RS25_9ROSA) 0.964801175330781 44 Solyc05g015330 LOW QUALITY:Nuclear transcription factor Y protein (AHRD V3.3 *** G7JC00_MEDTR) 0.9644060883138627 45 Solyc03g033390 F-box family protein (AHRD V3.3 *** A0A061DGH5_THECC) 0.963278478489425 46 Solyc11g012920 translation initiation factor (AHRD V3.3 *** AT1G44780.2) 0.9630143555368528 74 Solyc06g008150 Ulp1 protease family, C-terminal catalytic domain containing protein (AHRD V3.3 *-* Q60D46_SOLDE) 0.9617510125394378 48 Solyc01g066610 fanconi anemia group I-like protein (AHRD V3.3 *** AT5G49110.4) 0.961741450316132 51 Solyc09g009900 Nucleic acid-binding, OB-fold (AHRD V3.3 *** A0A103YMS1_CYNCS) 0.9616648267363459 50 Solyc10g081150 serine carboxypeptidase-like 43 (AHRD V3.3 --* AT2G12480.2) 0.9615377678273713 51 Solyc12g088530 cyclin A3.1 0.9612742624600555 52 Solyc01g079110 Histone H3 (AHRD V3.3 *** A0A0V0H170_SOLCH) 0.9612194073357653 76 Solyc01g058320 transmembrane protein (AHRD V3.3 *** AT3G17120.5) 0.9605181213171625 79 Solyc04g077510 Growth-regulating factor (AHRD V3.3 *** A0A072VEY4_MEDTR) 0.959938556547812 55 Solyc06g073820 Ubiquitin carboxyl-terminal hydrolase 12-like protein (AHRD V3.3 *** A0A0B0PTR8_GOSAR) 0.9598983554804382 56 Solyc03g119610 LOW QUALITY:ATP synthase subunit alpha, chloroplastic (AHRD V3.3 --* ATPA_SOLTU) 0.959838031711306 57 Solyc02g091690 bHLH transcription factor 081 0.9594096254587501 72 Solyc01g073940 Zinc finger transcription factor 9 0.9593755487207415 64 Solyc07g049450 Protein disulfide isomerase family (AHRD V3.3 *** A9CPA7_SOYBN) 0.9593716225235901 60 Solyc02g062780 chromatin remodeling 1 (AHRD V3.3 *** AT5G66750.1) 0.9588487822747879 61 Solyc01g111550 minichromosome maintenance 10 (AHRD V3.3 *** AT2G20980.1) 0.9584153690144533 62 Solyc06g082030 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT5G58660.1) 0.9583540030127929 63 Solyc01g080010 xyloglucan endoglucanase inhibitor 0.9581551294175511 69 Solyc01g111590 Transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** AT2G16780.1) 0.9576264881434752 65 Solyc08g076650 Trehalose-6-phosphate synthase, putative (AHRD V3.3 *** Q2A970_BRAOL) 0.9576145668888548 66 Solyc02g083450 Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT4G35880.1) 0.9575690610123335 78 Solyc07g024070 Ubiquitin-conjugating enzyme family protein (AHRD V3.3 *-* B6UES9_MAIZE) 0.9573846018104232 68 Solyc01g096860 AP2-like ethylene-responsive transcription factor (AHRD V3.3 *-* W9RR61_9ROSA) 0.9572446348917554 78 Solyc03g098340 Coiled-coil domain-containing 84 (AHRD V3.3 *-* A0A0B0Q3P2_GOSAR) 0.9572074513855988 70 Solyc03g121580 Transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** AT2G19520.1) 0.9570362659763908 71 Solyc09g015020 Heat-shock protein, putative (AHRD V3.3 *** B9S3B2_RICCO) 0.9570040587834638 72 Solyc06g068380 PPPDE thiol peptidase family protein, putative (AHRD V3.3 *-* A0A061G7Z7_THECC) 0.9569578979242783 73 Solyc05g010160 Importin, putative (AHRD V3.3 *** B9RLA7_RICCO) 0.9568956363735379 74 Solyc06g053220 Homeobox leucine zipper protein (AHRD V3.3 *** B8YIB0_MIRJA) 0.9568012931345092 83 Solyc05g018700 Protein disulfide-isomerase (AHRD V3.3 *** Q6IV17_IPOBA) 0.9561107449534962 76 Solyc03g025820 Shortage in chiasmata 1, putative (AHRD V3.3 *** A0A061G1E9_THECC) 0.9558833661005705 77 Solyc12g088500 cyclin A3_5 0.9557390239430571 78 Solyc07g017640 0.955327773039653 80 Solyc03g093490 WD-repeat protein, putative (AHRD V3.3 *** B9R9Y2_RICCO) 0.9553195532103881 81 Solyc03g119070 LOW QUALITY:Flap endonuclease 1 (AHRD V3.3 *** A0A0K9P479_ZOSMR) 0.9544629803864655 82 Solyc03g118040 calnexin 0.9541917393303008 83 Solyc01g057520 ARM repeat superfamily protein (AHRD V3.3 *** A0A061EX70_THECC) 0.953964602007134 84 Solyc12g089330 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** AT1G20080.5) 0.9535705180364168 85 Solyc08g015630 Inositol-tetrakisphosphate 1-kinase (AHRD V3.3 *** M1CD44_SOLTU) 0.9532350201883568 87 Solyc01g068260 BRCT domain-containing family protein (AHRD V3.3 *-* U5GIX9_POPTR) 0.9531716826937283 88 Solyc02g077250 LOW QUALITY:TCP transcription factor 1 0.9531039357955146 89 Solyc07g062100 PHD-zinc-finger-like domain protein (AHRD V3.3 *** G7ZV42_MEDTR) 0.9530861326426772 90 Solyc09g091370 holliday junction resolvase (AHRD V3.3 *** AT1G04650.1) 0.9527962173294443 91 Solyc01g100380 Calreticulin (AHRD V3.3 *** CALR_NICPL) 0.9527098416941712 92 Solyc12g017410 Zinc finger transcription factor 76 0.9525809182634324 93 Solyc02g091660 Transcription factor GTE4 (AHRD V3.3 *** A0A0B2QCM2_GLYSO) 0.9523430631663268 97 Solyc03g098490 LOW QUALITY:Cotton fiber expressed protein (AHRD V3.3 *** A0A109XNG5_GOSHI) 0.9520552129270002 96 Solyc12g088520 cyclin A3_3 0.9515305984109507 97 Solyc03g116560 Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9MU52_POPTR) 0.9512596510934545 98 Solyc09g007630 P58IPK 0.9508391922149144 99 Solyc10g086760 Tubulin beta chain (AHRD V3.3 *** A0A103XQ61_CYNCS) 0.9502225175902537 100