Sequence Description Alias PCC hrr evm.model.tig00021339.35 no hits & (original description: no original description) 0.9441828713740743 5 evm.model.tig00001155.18 no hits & (original description: no original description) 0.9433046839319387 2 evm.model.tig00000615.8 (p28734|aatc_dauca : 404.0) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1) (Transaminase A) - Daucus carota (Carrot) & (at5g11520 : 397.0) Encodes the chloroplastic isozyme of aspartate aminotransferase. Involved in aspartate biosynthesis and nitrogen metabolism. mRNA is expressed in senescing leaves.; aspartate aminotransferase 3 (ASP3); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity; INVOLVED IN: leaf senescence, nitrogen compound metabolic process; LOCATED IN: peroxisome, plastid, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 2 (TAIR:AT5G19550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 794.0) & (original description: no original description) 0.9426965668451454 3 evm.model.tig00000405.18 (at4g29510 : 402.0) Has arginine N-methyltransferase activity. Modifies AtMBD7.; arginine methyltransferase 11 (PRMT11); FUNCTIONS IN: protein-arginine N-methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2778 Blast hits to 2730 proteins in 659 species: Archae - 61; Bacteria - 655; Metazoa - 1180; Fungi - 241; Plants - 326; Viruses - 1; Other Eukaryotes - 314 (source: NCBI BLink). & (reliability: 804.0) & (original description: no original description) 0.9423655029308481 4 evm.model.tig00021281.39 (at1g13700 : 110.0) 6-phosphogluconolactonase 1 (PGL1); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: pentose-phosphate shunt, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT5G24400.1); Has 3744 Blast hits to 3744 proteins in 1410 species: Archae - 0; Bacteria - 2521; Metazoa - 189; Fungi - 243; Plants - 155; Viruses - 0; Other Eukaryotes - 636 (source: NCBI BLink). & (reliability: 220.0) & (original description: no original description) 0.9410881245311435 6 evm.model.tig00001021.10 no hits & (original description: no original description) 0.9393989347065711 7 evm.model.tig00000204.79 (at1g12910 : 429.0) Encodes a protein with similarity to the petunia WD repeat protein an11.; ANTHOCYANIN11 (ATAN11); CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G26640.1); Has 4731 Blast hits to 4446 proteins in 351 species: Archae - 6; Bacteria - 291; Metazoa - 1848; Fungi - 1200; Plants - 767; Viruses - 0; Other Eukaryotes - 619 (source: NCBI BLink). & (reliability: 858.0) & (original description: no original description) 0.9336373148656513 13 evm.model.tig00000863.14 (at5g12470 : 196.0) Protein of unknown function (DUF3411); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF399 and DUF3411) (TAIR:AT2G40400.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 392.0) & (original description: no original description) 0.9280188524974797 8 evm.model.tig00020538.17 no hits & (original description: no original description) 0.9247229481057497 21 evm.model.tig00000144.176 (at3g57560 : 211.0) encodes a N-acetylglutamate kinase, involved in arginine biosynthesis; N-acetyl-l-glutamate kinase (NAGK); FUNCTIONS IN: acetylglutamate kinase activity; INVOLVED IN: arginine biosynthetic process via ornithine, arginine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: N-acetylglutamate kinase (InterPro:IPR011148), Glutamate 5-kinase (InterPro:IPR001057), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Acetylglutamate kinase (InterPro:IPR004662); BEST Arabidopsis thaliana protein match is: N-acetyl-l-glutamate synthase 2 (TAIR:AT4G37670.2); Has 9387 Blast hits to 9387 proteins in 2227 species: Archae - 281; Bacteria - 6131; Metazoa - 9; Fungi - 140; Plants - 140; Viruses - 0; Other Eukaryotes - 2686 (source: NCBI BLink). & (reliability: 422.0) & (original description: no original description) 0.9220625006585473 15 evm.model.tig00020710.120 (at2g31030 : 92.4) OSBP(oxysterol binding protein)-related protein 1B (ORP1B); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1A (TAIR:AT2G31020.1); Has 2291 Blast hits to 2240 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 1139; Fungi - 602; Plants - 285; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink). & (reliability: 184.8) & (original description: no original description) 0.9219485371796032 25 evm.model.tig00020780.47 (p24847|dapa2_wheat : 300.0) Dihydrodipicolinate synthase 2, chloroplast precursor (EC 4.2.1.52) (DHDPS 2) - Triticum aestivum (Wheat) & (at2g45440 : 295.0) Encodes a protein that likely has dihydropicolinate synthase activity based on its mutant phenotype of decreased lysine levels and increased aspartate levels. The mutant also has increased levels of threonine. The enzyme is predicted to localize to the chloroplast.; dihydrodipicolinate synthase (DHDPS2); FUNCTIONS IN: dihydrodipicolinate synthase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate, metabolic process, diaminopimelate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Dihydrodipicolinate synthase subfamily (InterPro:IPR005263), Dihydrodipicolinate synthetase (InterPro:IPR002220), Dihydrodipicolinate synthetase, active site (InterPro:IPR020625), Dihydrodipicolinate synthetase, conserved site (InterPro:IPR020624); BEST Arabidopsis thaliana protein match is: dihydrodipicolinate synthase 1 (TAIR:AT3G60880.2); Has 13334 Blast hits to 13334 proteins in 2656 species: Archae - 353; Bacteria - 9459; Metazoa - 101; Fungi - 305; Plants - 96; Viruses - 0; Other Eukaryotes - 3020 (source: NCBI BLink). & (reliability: 590.0) & (original description: no original description) 0.921491155626598 12 evm.model.tig00000194.58 (at3g15610 : 290.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G52730.1); Has 43706 Blast hits to 23089 proteins in 800 species: Archae - 76; Bacteria - 7357; Metazoa - 15603; Fungi - 10314; Plants - 4879; Viruses - 0; Other Eukaryotes - 5477 (source: NCBI BLink). & (reliability: 580.0) & (original description: no original description) 0.9165355817203147 16 evm.model.tig00021038.84 (at3g54960 : 229.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.; PDI-like 1-3 (PDIL1-3); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to endoplasmic reticulum stress; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-4 (TAIR:AT5G60640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p52589|pdi_wheat : 225.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Triticum aestivum (Wheat) & (reliability: 458.0) & (original description: no original description) 0.9071431943327565 37 evm.model.tig00020849.11 no hits & (original description: no original description) 0.906826685317556 29 evm.model.tig00000331.8 no hits & (original description: no original description) 0.9053128548003601 62 evm.model.tig00000217.14 (q6av34|argc_orysa : 464.0) Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplast precursor (EC 1.2.1.38) (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) - Oryza sativa (Rice) & (at2g19940 : 443.0) oxidoreductases, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;copper ion binding; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, copper ion binding; INVOLVED IN: response to cadmium ion, cellular amino acid metabolic process; LOCATED IN: nucleolus, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Semialdehyde dehydrogenase, dimerisation domain (InterPro:IPR012280), Semialdehyde dehydrogenase, NAD-binding (InterPro:IPR000534), N-acetyl-gamma-glutamyl-phosphate reductase (InterPro:IPR000706); Has 8034 Blast hits to 8033 proteins in 2187 species: Archae - 385; Bacteria - 4804; Metazoa - 0; Fungi - 163; Plants - 77; Viruses - 0; Other Eukaryotes - 2605 (source: NCBI BLink). & (reliability: 886.0) & (original description: no original description) 0.904891108316396 33 evm.model.tig00021179.14 no hits & (original description: no original description) 0.904344625186214 18 evm.model.tig00000350.46 (q41745|lpat_maize : 133.0) 1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1 (EC 2.3.1.51) (Phospholipid synthesis protein 1) - Zea mays (Maize) & (at3g57650 : 126.0) Encodes an endoplasmic reticulum localized protein with lysophosphatidyl acyltransferase activity.; lysophosphatidyl acyltransferase 2 (LPAT2); FUNCTIONS IN: 1-acylglycerol-3-phosphate O-acyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 3 (TAIR:AT1G51260.1); Has 1646 Blast hits to 1643 proteins in 516 species: Archae - 0; Bacteria - 639; Metazoa - 536; Fungi - 213; Plants - 138; Viruses - 2; Other Eukaryotes - 118 (source: NCBI BLink). & (reliability: 252.0) & (original description: no original description) 0.9042606473649547 23 evm.model.tig00020660.38 no hits & (original description: no original description) 0.9040770742907137 81 evm.model.tig00020934.35 (at3g20020 : 210.0) protein arginine methyltransferase 6 (PRMT6); FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2687 Blast hits to 2666 proteins in 709 species: Archae - 44; Bacteria - 791; Metazoa - 996; Fungi - 246; Plants - 285; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (reliability: 420.0) & (original description: no original description) 0.9027762536518201 31 evm.model.tig00021036.9 no hits & (original description: no original description) 0.9013018477420864 46 evm.model.tig00000630.13 no hits & (original description: no original description) 0.9001897612683568 78 evm.model.tig00000523.55 no hits & (original description: no original description) 0.9000235500378715 24 evm.model.tig00000655.54 (at1g64650 : 377.0) Major facilitator superfamily protein; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G27720.1); Has 856 Blast hits to 849 proteins in 287 species: Archae - 16; Bacteria - 476; Metazoa - 88; Fungi - 64; Plants - 135; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (reliability: 754.0) & (original description: no original description) 0.8999561320714581 41 evm.model.tig00021319.69 (at1g73660 : 172.0) Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance.; protein tyrosine kinase family protein; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Ubiquitin interacting motif (InterPro:IPR003903), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18160.1); Has 126827 Blast hits to 124278 proteins in 4857 species: Archae - 98; Bacteria - 13376; Metazoa - 48156; Fungi - 11388; Plants - 33654; Viruses - 503; Other Eukaryotes - 19652 (source: NCBI BLink). & (q8l4h4|nork_medtr : 85.1) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 344.0) & (original description: no original description) 0.8996304145539039 27 evm.model.tig00001130.27 (at5g55550 : 194.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G26650.2). & (q08935|roc1_nicsy : 91.7) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (reliability: 388.0) & (original description: no original description) 0.8975116763481291 36 evm.model.tig00001130.29 no hits & (original description: no original description) 0.8954401608309045 31 evm.model.tig00020554.143 no hits & (original description: no original description) 0.8948810393449738 43 evm.model.tig00020553.146 (at1g07350 : 106.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G35785.3); Has 999351 Blast hits to 998918 proteins in 36088 species: Archae - 21775; Bacteria - 603314; Metazoa - 202027; Fungi - 24253; Plants - 55487; Viruses - 69473; Other Eukaryotes - 23022 (source: NCBI BLink). & (reliability: 199.6) & (original description: no original description) 0.8946123949756384 33 evm.model.tig00020563.199 no hits & (original description: no original description) 0.8935847425302391 68 evm.model.tig00020510.43 no hits & (original description: no original description) 0.893495549126709 84 evm.model.tig00020965.64 no hits & (original description: no original description) 0.893457981085224 45 evm.model.tig00000058.4 no hits & (original description: no original description) 0.8868137965873524 37 evm.model.tig00020531.14 no hits & (original description: no original description) 0.8851973610621243 73 evm.model.tig00021489.10 no hits & (original description: no original description) 0.8845392147425049 46 evm.model.tig00001487.4 no hits & (original description: no original description) 0.8838790394025088 40 evm.model.tig00000792.34 (at1g50320 : 84.0) encodes a prokaryotic thioredoxin; thioredoxin X (THX); FUNCTIONS IN: enzyme activator activity; INVOLVED IN: positive regulation of catalytic activity; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin Y1 (TAIR:AT1G76760.1); Has 20779 Blast hits to 19654 proteins in 2968 species: Archae - 276; Bacteria - 11383; Metazoa - 2412; Fungi - 1075; Plants - 1697; Viruses - 7; Other Eukaryotes - 3929 (source: NCBI BLink). & (reliability: 168.0) & (original description: no original description) 0.8836941895733281 41 evm.model.tig00020723.66 no hits & (original description: no original description) 0.8826023447134249 44 evm.model.tig00001501.3 (at1g04510 : 193.0) Encodes MAC3A, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19. Associated with the MOS4-Associated Complex (MAC). Involved in plant innate immunity.; MOS4-associated complex 3A (MAC3A); FUNCTIONS IN: ubiquitin-protein ligase activity, nucleotide binding; INVOLVED IN: response to cadmium ion, defense response to bacterium; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), U box domain (InterPro:IPR003613), WD40 repeat (InterPro:IPR001680), Pre-mRNA-splicing factor 19 (InterPro:IPR013915), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated complex 3B (TAIR:AT2G33340.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 384.0) & (original description: no original description) 0.8806169759011893 43 evm.model.tig00000144.18 (at2g45200 : 130.0) Encodes a member of the GOS1 (Golgi SNARE) gene family.; golgi snare 12 (GOS12); FUNCTIONS IN: SNARE binding; INVOLVED IN: cellular membrane fusion, intra-Golgi vesicle-mediated transport; LOCATED IN: cytosol, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: golgi snare 11 (TAIR:AT1G15880.1). & (reliability: 260.0) & (original description: no original description) 0.8805053960080426 73 evm.model.tig00000189.45 no hits & (original description: no original description) 0.8789590045646347 45 evm.model.tig00020553.102 (at4g25120 : 159.0) Encodes a homolog of the yeast SRS2 (Suppressor of RAD Six-screen mutant 2) helicase. The Arabidopsis SRS2 is a functional 3í- to 5í-helicase. Biochemical studies show that SRS2 disrupts recombinogenic DNA intermediates and facilitates single strand annealing.; SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2 (SRS2); CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD-like, C-terminal (InterPro:IPR014017), Helicase, superfamily 1, UvrD-related (InterPro:IPR014016), DNA helicase, UvrD/REP type (InterPro:IPR000212); Has 26201 Blast hits to 22116 proteins in 2711 species: Archae - 259; Bacteria - 18888; Metazoa - 18; Fungi - 176; Plants - 81; Viruses - 13; Other Eukaryotes - 6766 (source: NCBI BLink). & (reliability: 318.0) & (original description: no original description) 0.8774798571597509 94 evm.model.tig00000792.19 (at5g48570 : 102.0) FKBP-type peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity, calmodulin binding; INVOLVED IN: protein folding; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: rotamase FKBP 1 (TAIR:AT3G25230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43207|fkb70_wheat : 100.0) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (reliability: 204.0) & (original description: no original description) 0.8765306078681255 96 evm.model.tig00001542.15 no hits & (original description: no original description) 0.872908148332794 62 evm.model.tig00000704.42 (at3g59870 : 150.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G43945.1); Has 292 Blast hits to 292 proteins in 84 species: Archae - 0; Bacteria - 122; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (reliability: 300.0) & (original description: no original description) 0.8728118071869778 63 evm.model.tig00000237.8 no hits & (original description: no original description) 0.8720234922531298 64 evm.model.tig00020553.170 (at3g46970 : 406.0) Encodes a cytosolic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for branched polysaccharides, such as glycogen.; alpha-glucan phosphorylase 2 (PHS2); FUNCTIONS IN: phosphorylase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cadmium ion, response to water deprivation; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 35 (InterPro:IPR000811), Glycogen/starch/alpha-glucan phosphorylase (InterPro:IPR011833); BEST Arabidopsis thaliana protein match is: Glycosyl transferase, family 35 (TAIR:AT3G29320.1); Has 5792 Blast hits to 5741 proteins in 1741 species: Archae - 74; Bacteria - 3953; Metazoa - 555; Fungi - 138; Plants - 232; Viruses - 2; Other Eukaryotes - 838 (source: NCBI BLink). & (q9lkj3|phsh_wheat : 405.0) Alpha-glucan phosphorylase, H isozyme (EC 2.4.1.1) (Starch phosphorylase H) - Triticum aestivum (Wheat) & (reliability: 812.0) & (original description: no original description) 0.8696178281505208 88 evm.model.tig00021221.8 no hits & (original description: no original description) 0.8693386061562492 63 evm.model.tig00021127.89 no hits & (original description: no original description) 0.8678528847822014 65 evm.model.tig00000600.10 (at5g61460 : 294.0) Encodes SMC6B (STRUCTURAL MAINTENANCE OF CHROMOSOMES 6B), a component of the SMC5/6 complex. SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage.; hypersensitive to MMS, irradiation and MMC (MIM); FUNCTIONS IN: ATP binding; INVOLVED IN: double-strand break repair, sister chromatid cohesion, chromosome segregation, response to X-ray, double-strand break repair via homologous recombination; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 6A (TAIR:AT5G07660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 588.0) & (original description: no original description) 0.8672419691063851 98 evm.model.tig00021589.28 (at3g26560 : 335.0) ATP-dependent RNA helicase, putative; FUNCTIONS IN: in 6 functions; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Domain of unknown function DUF1605 (InterPro:IPR011709), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G32490.2); Has 53052 Blast hits to 35825 proteins in 3176 species: Archae - 195; Bacteria - 13845; Metazoa - 17201; Fungi - 5520; Plants - 3365; Viruses - 1203; Other Eukaryotes - 11723 (source: NCBI BLink). & (reliability: 670.0) & (original description: no original description) 0.8664177808238566 67 evm.model.tig00020909.37 (at1g54510 : 160.0) Encodes AtNEK1, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.; NIMA-related serine/threonine kinase 1 (NEK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NIMA-related kinase 2 (TAIR:AT3G04810.2). & (q5qn75|m2k1_orysa : 111.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 320.0) & (original description: no original description) 0.866189475742892 68 evm.model.tig00000478.19 no hits & (original description: no original description) 0.8656323911623733 70 evm.model.tig00000145.9 (at2g40840 : 156.0) Encodes a cytosolic protein with transglucosidase and amylomaltase activity. It is an essential component of the pathway from starch to sucrose and cellular metabolism in leaves at night. The protein binds to heteroglycans and utilizes glucose, mannose and xylose as acceptors. Fucose and galactose can also act as acceptors but less efficiently than the previous three. It was also was also recently reported to act on maltodextrins. On the other hand, arabinose and fructose were not efficiently used. Its role probably includes metabolizing maltose exported from the chloroplast. Studies using maltose extracted from the double mutant be2-1 be3-2 showed that this enzyme is preferentially active of β-maltose.; disproportionating enzyme 2 (DPE2); FUNCTIONS IN: 4-alpha-glucanotransferase activity, heteroglycan binding; INVOLVED IN: polysaccharide metabolic process, circadian rhythm, maltose catabolic process, maltose metabolic process, starch catabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, family 77 (InterPro:IPR003385), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: disproportionating enzyme (TAIR:AT5G64860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q06801|dpep_soltu : 95.1) 4-alpha-glucanotransferase, chloroplast precursor (EC 2.4.1.25) (Amylomaltase) (Disproportionating enzyme) (D-enzyme) - Solanum tuberosum (Potato) & (reliability: 312.0) & (original description: no original description) 0.8645457947996312 93 evm.model.tig00021038.68 no hits & (original description: no original description) 0.8636881578257906 81 evm.model.tig00001590.11 no hits & (original description: no original description) 0.8636820957036372 78 evm.model.tig00021537.17 (at1g07360 : 274.0) CCCH-type zinc fingerfamily protein with RNA-binding domain; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: CCCH-type zinc fingerfamily protein with RNA-binding domain (TAIR:AT2G29580.1); Has 18250 Blast hits to 13471 proteins in 794 species: Archae - 12; Bacteria - 1319; Metazoa - 6997; Fungi - 3518; Plants - 3570; Viruses - 267; Other Eukaryotes - 2567 (source: NCBI BLink). & (reliability: 548.0) & (original description: no original description) 0.8635899733020104 92 evm.model.tig00000870.42 no hits & (original description: no original description) 0.863294538639087 80 evm.model.tig00001030.11 (at5g23580 : 243.0) unique family of enzymes containing a single polypeptide chain with a kinase domain at the amino terminus and a putative calcium-binding EF hands structure at the carboxyl terminus; recombinant protein is fully active and induced by Ca2+; calmodulin-like domain protein kinase 9 (CDPK9); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 2 (TAIR:AT1G35670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p28583|cdpk_soybn : 240.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (reliability: 486.0) & (original description: no original description) 0.8632622219205692 81 evm.model.tig00000241.102 no hits & (original description: no original description) 0.8596090279216144 89 evm.model.tig00000269.111 (at3g49660 : 123.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 118516 Blast hits to 43755 proteins in 1024 species: Archae - 92; Bacteria - 12360; Metazoa - 47439; Fungi - 25856; Plants - 15887; Viruses - 9; Other Eukaryotes - 16873 (source: NCBI BLink). & (p93340|gblp_nicpl : 114.0) Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 246.0) & (original description: no original description) 0.8595669107578052 90 evm.model.tig00000980.4 no hits & (original description: no original description) 0.8590195241936334 94 evm.model.tig00000241.130 no hits & (original description: no original description) 0.8572604557876495 99