Sequence Description Alias PCC hrr evm.model.tig00020553.275 (o65361|p5cs_mescr : 290.0) Delta 1-pyrroline-5-carboxylate synthetase (P5CS) [Includes: Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK); Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma- & (at2g39800 : 289.0) delta1-pyrroline-5-carboxylate synthase 1 (P5CS1); CONTAINS InterPro DOMAIN/s: Glutamate 5-kinase (InterPro:IPR001057), Glutamate 5-kinase, conserved site (InterPro:IPR019797), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Gamma-glutamyl phosphate reductase GPR, conserved site (InterPro:IPR020593), Aldehyde dehydrogenase, C-terminal (InterPro:IPR016163), Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Delta l-pyrroline-5-carboxylate synthetase (InterPro:IPR005766), Gamma-glutamyl phosphate reductase GPR (InterPro:IPR000965), Aldehyde dehydrogenase (InterPro:IPR015590), Glutamate 5-kinase, ProB-related (InterPro:IPR005715); BEST Arabidopsis thaliana protein match is: delta 1-pyrroline-5-carboxylate synthase 2 (TAIR:AT3G55610.1). & (reliability: 578.0) & (original description: no original description) 0.9789665785202097 1 evm.model.tig00020537.26 (at4g33680 : 376.0) Involved in disease resistance against Pseudomonas syringae. mutants have elevated SA levels, a low level of spontaneous cell death, callose deposition, and enlarged cells in leaves. genetically maps on chr 4 between L23H3 and nga1139.; ABERRANT GROWTH AND DEATH 2 (AGD2); FUNCTIONS IN: transaminase activity, copper ion binding, L,L-diaminopimelate aminotransferase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: LL-diaminopimelate aminotransferase, plant-related (InterPro:IPR019942), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: AGD2-like defense response protein 1 (TAIR:AT2G13810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 752.0) & (original description: no original description) 0.9757518673741616 2 evm.model.tig00021319.17 (at4g39460 : 135.0) Encodes a plastid metabolite transporter required for the import of S-Adenosylmethionine from the cytosol. Impaired function of SAMT1 led to decreased accumulation of prenyllipids and mainly affected the chlorophyll pathway.; S-adenosylmethionine carrier 1 (SAMC1); CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 2 (TAIR:AT1G34065.1). & (reliability: 270.0) & (original description: no original description) 0.972135762476256 4 evm.model.tig00020912.30 (at3g06460 : 82.8) GNS1/SUR4 membrane protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: GNS1/SUR4 membrane protein (InterPro:IPR002076); BEST Arabidopsis thaliana protein match is: GNS1/SUR4 membrane protein family (TAIR:AT3G06470.1); Has 2223 Blast hits to 2217 proteins in 255 species: Archae - 0; Bacteria - 0; Metazoa - 1419; Fungi - 367; Plants - 108; Viruses - 14; Other Eukaryotes - 315 (source: NCBI BLink). & (reliability: 165.6) & (original description: no original description) 0.9720040811616136 4 evm.model.tig00000402.19 (q39315|acbp_brana : 89.7) Acyl-CoA-binding protein (ACBP) - Brassica napus (Rape) & (at1g31812 : 84.3) Acyl-CoA-binding protein. Bind acyl-CoA esters and protect acyl-CoAs from degradation by microsomal acyl-hydrolases.; acyl-CoA-binding protein 6 (ACBP6); FUNCTIONS IN: phosphatidylcholine binding, acyl-CoA binding; INVOLVED IN: response to freezing, response to cold, lipid transport; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA-binding protein, ACBP (InterPro:IPR000582), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 1 (TAIR:AT5G53470.1); Has 1828 Blast hits to 1828 proteins in 405 species: Archae - 0; Bacteria - 293; Metazoa - 888; Fungi - 180; Plants - 233; Viruses - 0; Other Eukaryotes - 234 (source: NCBI BLink). & (reliability: 168.6) & (original description: no original description) 0.9709021425562437 5 evm.model.tig00001154.33 no hits & (original description: no original description) 0.9658216579421329 6 evm.model.tig00000194.80 (at1g56050 : 404.0) GTP-binding protein-related; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF933 (InterPro:IPR013029), TGS-like (InterPro:IPR012676), GTP1/OBG (InterPro:IPR006073), Conserved hypothetical protein CHP00092 (InterPro:IPR004396), GTP-binding protein, HSR1-related (InterPro:IPR002917), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: GTP binding (TAIR:AT1G30580.1); Has 18400 Blast hits to 18396 proteins in 3002 species: Archae - 377; Bacteria - 10244; Metazoa - 785; Fungi - 603; Plants - 304; Viruses - 0; Other Eukaryotes - 6087 (source: NCBI BLink). & (reliability: 808.0) & (original description: no original description) 0.9618886392221552 7 evm.model.tig00001033.10 (at5g36210 : 107.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375); BEST Arabidopsis thaliana protein match is: acylaminoacyl-peptidase-related (TAIR:AT4G14570.1); Has 7796 Blast hits to 7784 proteins in 1167 species: Archae - 215; Bacteria - 4533; Metazoa - 751; Fungi - 258; Plants - 220; Viruses - 0; Other Eukaryotes - 1819 (source: NCBI BLink). & (reliability: 214.0) & (original description: no original description) 0.95146797101685 8 evm.model.tig00001126.9 (at1g30230 : 81.6) Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: plasma membrane, eukaryotic translation elongation factor 1 complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange (InterPro:IPR014038), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Translation elongation factor EF1B, beta/delta chains, conserved site (InterPro:IPR001326); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1B/ribosomal protein S6 family protein (TAIR:AT2G18110.1); Has 1008 Blast hits to 1006 proteins in 266 species: Archae - 0; Bacteria - 0; Metazoa - 526; Fungi - 158; Plants - 163; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (o81918|ef1d_betvu : 80.5) Elongation factor 1-delta (EF-1-delta) (Elongation factor 1B-beta) (eEF-1B beta) - Beta vulgaris (Sugar beet) & (reliability: 163.2) & (original description: no original description) 0.9513447316517751 9 evm.model.tig00020816.109 (p30706|plsb_pea : 214.0) Glycerol-3-phosphate acyltransferase, chloroplast precursor (EC 2.3.1.15) (GPAT) - Pisum sativum (Garden pea) & (at1g32200 : 204.0) Encodes a chloroplast glycerol-3-phosphate acyltransferase.Involved in the biosynthesis of chloroplast phosphatidylglycerol.; ATS1; FUNCTIONS IN: glycerol-3-phosphate O-acyltransferase activity; INVOLVED IN: phosphatidylglycerol biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123), Glycerol-3-phosphate O-acyltransferase (InterPro:IPR016222); Has 391 Blast hits to 391 proteins in 121 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 291; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 408.0) & (original description: no original description) 0.9499084663430881 10 evm.model.tig00020943.86 (at1g09795 : 271.0) ATP phosphoribosyl transferase, catalyses first step of histidine biosynthesis; ATP phosphoribosyl transferase 2 (ATP-PRT2); FUNCTIONS IN: ATP phosphoribosyltransferase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histidine biosynthesis HisG: ATP phosphoribosyltransferase (InterPro:IPR001348), ATP phosphoribosyltransferase, conserved site (InterPro:IPR018198), ATP phosphoribosyltransferase, catalytic domain (InterPro:IPR013820), Histidine biosynthesis HisG, C-terminal (InterPro:IPR013115), Nitrogen regulatory PII-like, alpha/beta (InterPro:IPR011322); BEST Arabidopsis thaliana protein match is: ATP phosphoribosyl transferase 1 (TAIR:AT1G58080.1); Has 6354 Blast hits to 6354 proteins in 2167 species: Archae - 206; Bacteria - 4075; Metazoa - 2; Fungi - 141; Plants - 71; Viruses - 0; Other Eukaryotes - 1859 (source: NCBI BLink). & (reliability: 542.0) & (original description: no original description) 0.9490240947745816 14 evm.model.tig00000870.36 (at1g80560 : 405.0) The AtIMD2 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids.; isopropylmalate dehydrogenase 2 (IMD2); FUNCTIONS IN: 3-isopropylmalate dehydrogenase activity; INVOLVED IN: leucine biosynthetic process, metabolic process; LOCATED IN: chloroplast, chloroplast stroma, plastid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Isopropylmalate dehydrogenase (InterPro:IPR004429), Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isopropylmalate dehydrogenase 3 (TAIR:AT1G31180.1); Has 15265 Blast hits to 15265 proteins in 2613 species: Archae - 395; Bacteria - 8292; Metazoa - 578; Fungi - 832; Plants - 243; Viruses - 0; Other Eukaryotes - 4925 (source: NCBI BLink). & (p29102|leu3_brana : 404.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Brassica napus (Rape) & (reliability: 810.0) & (original description: no original description) 0.948822682054264 12 evm.model.tig00000241.120 (p49094|asns_maize : 582.0) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (Glutamine-dependent asparagine synthetase) - Zea mays (Maize) & (at5g10240 : 556.0) Encodes asparagine synthetase (ASN3).; asparagine synthetase 3 (ASN3); FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity; INVOLVED IN: asparagine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Asparagine synthase (InterPro:IPR001962), Asparagine synthase, glutamine-hydrolyzing (InterPro:IPR006426), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: asparagine synthetase 2 (TAIR:AT5G65010.1); Has 13137 Blast hits to 12731 proteins in 2385 species: Archae - 388; Bacteria - 8359; Metazoa - 215; Fungi - 297; Plants - 415; Viruses - 9; Other Eukaryotes - 3454 (source: NCBI BLink). & (reliability: 1112.0) & (original description: no original description) 0.9476845499408468 13 evm.model.tig00020510.54 (q6f2u9|syk_orysa : 425.0) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) & (at3g11710 : 408.0) lysyl-tRNA synthetase 1 (ATKRS-1); FUNCTIONS IN: ATP binding, lysine-tRNA ligase activity; INVOLVED IN: lysyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Lysyl-tRNA synthetase, class II, C-terminal (InterPro:IPR018149), Lysyl-tRNA synthetase, class II (InterPro:IPR002313), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Lysyl-tRNA synthetase, class II (TAIR:AT3G13490.1); Has 24040 Blast hits to 20328 proteins in 2969 species: Archae - 380; Bacteria - 16623; Metazoa - 629; Fungi - 774; Plants - 209; Viruses - 0; Other Eukaryotes - 5425 (source: NCBI BLink). & (reliability: 816.0) & (original description: no original description) 0.9474298699002115 14 evm.model.tig00020930.20 no hits & (original description: no original description) 0.9466545631897483 15 evm.model.tig00000144.156 (at3g04600 : 374.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotide binding, tryptophan-tRNA ligase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, tryptophanyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 2274 Blast hits to 2202 proteins in 759 species: Archae - 483; Bacteria - 800; Metazoa - 304; Fungi - 267; Plants - 65; Viruses - 5; Other Eukaryotes - 350 (source: NCBI BLink). & (reliability: 748.0) & (original description: no original description) 0.9444460818139551 16 evm.model.tig00020927.39 (at4g36400 : 439.0) Encodes a (D)-2-hydroxyglutarate dehydrogenase.; FAD-linked oxidases family protein; FUNCTIONS IN: electron carrier activity, (R)-2-hydroxyglutarate dehydrogenase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase, C-terminal (InterPro:IPR004113), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167); BEST Arabidopsis thaliana protein match is: FAD-linked oxidases family protein (TAIR:AT5G06580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 878.0) & (original description: no original description) 0.9436205971729482 17 evm.model.tig00020604.28 (at5g49950 : 218.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G34340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 436.0) & (original description: no original description) 0.9434401614538693 18 evm.model.tig00020538.59 no hits & (original description: no original description) 0.9413019169545283 19 evm.model.tig00001530.4 (p93254|metk_mescr : 488.0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase) - Mesembryanthemum crystallinum (Common ice plant) & (at3g17390 : 487.0) S-adenosylmethionine synthetase; METHIONINE OVER-ACCUMULATOR 3 (MTO3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: lignin biosynthetic process, response to cold, methionine metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: nucleolus, cell wall, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10856 Blast hits to 10849 proteins in 2868 species: Archae - 12; Bacteria - 5440; Metazoa - 373; Fungi - 167; Plants - 707; Viruses - 1; Other Eukaryotes - 4156 (source: NCBI BLink). & (reliability: 948.0) & (original description: no original description) 0.9411144549536355 20 evm.model.tig00000615.80 no hits & (original description: no original description) 0.93924973130951 21 evm.model.tig00000955.11 (at4g09020 : 389.0) Encodes an isoamylase-like protein. Mutant studies show that the gene is strongly involved in starch breakdown. A GUS-protein fusion product was shown to localize to the surface of chloroplastic structures reminiscent of starch granules. In the mutants, the chloroplastic α-amylase AMY3 is upregulated.; isoamylase 3 (ISA3); FUNCTIONS IN: isoamylase activity, alpha-amylase activity; INVOLVED IN: carbohydrate metabolic process, starch catabolic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast starch grain; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Immunoglobulin-like fold (InterPro:IPR013783), Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: isoamylase 1 (TAIR:AT2G39930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 704.0) & (original description: no original description) 0.9383703927398429 22 evm.model.tig00020510.55 (q6f2u9|syk_orysa : 184.0) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) & (at3g11710 : 176.0) lysyl-tRNA synthetase 1 (ATKRS-1); FUNCTIONS IN: ATP binding, lysine-tRNA ligase activity; INVOLVED IN: lysyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Lysyl-tRNA synthetase, class II, C-terminal (InterPro:IPR018149), Lysyl-tRNA synthetase, class II (InterPro:IPR002313), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Lysyl-tRNA synthetase, class II (TAIR:AT3G13490.1); Has 24040 Blast hits to 20328 proteins in 2969 species: Archae - 380; Bacteria - 16623; Metazoa - 629; Fungi - 774; Plants - 209; Viruses - 0; Other Eukaryotes - 5425 (source: NCBI BLink). & (reliability: 352.0) & (original description: no original description) 0.936677237128619 23 evm.model.tig00020964.34 (at5g58970 : 119.0) uncoupling protein; uncoupling protein 2 (UCP2); FUNCTIONS IN: oxidative phosphorylation uncoupler activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrion, endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial brown fat uncoupling protein (InterPro:IPR002030), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: plant uncoupling mitochondrial protein 1 (TAIR:AT3G54110.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 238.0) & (original description: no original description) 0.9360071941363486 24 evm.model.tig00020629.131 no hits & (original description: no original description) 0.9288594592321547 25 evm.model.tig00000711.37 (p11043|aroa_pethy : 504.0) 3-phosphoshikimate 1-carboxyvinyltransferase, chloroplast precursor (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) - Petunia hybrida (Petunia) & (at2g45300 : 484.0) encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis; RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta; FUNCTIONS IN: 3-phosphoshikimate 1-carboxyvinyltransferase activity; INVOLVED IN: glyphosate metabolic process, chorismate biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: 3-phosphoshikimate 1-carboxyvinyltransferase, core (InterPro:IPR001986), 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup (InterPro:IPR006264), RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (InterPro:IPR013792); BEST Arabidopsis thaliana protein match is: RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (TAIR:AT1G48860.1); Has 13824 Blast hits to 13779 proteins in 2767 species: Archae - 215; Bacteria - 9594; Metazoa - 6; Fungi - 149; Plants - 206; Viruses - 0; Other Eukaryotes - 3654 (source: NCBI BLink). & (reliability: 968.0) & (original description: no original description) 0.9284514149988977 26 evm.model.tig00001038.6 (at5g36880 : 570.0) Encodes a plastidic acetyl-coA synthetase. This enzyme plays a role in converting acetate to acetyl-coA in the plastids. It does not appear to be a major contributor to fatty acid biosynthesis based on mutant phenotypes. The enzyme seems to act as a monomer and may play an important role in preventing the toxic accumulation of fermentation products including acetaldehyde, acetate, and ethanol. It participates in the pyruvate dehydrogenase bypass pathway; acetyl-CoA synthetase (ACS); FUNCTIONS IN: acetate-CoA ligase activity; INVOLVED IN: metabolic process, acetate metabolic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acetate--CoA ligase (InterPro:IPR011904), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 68981 Blast hits to 63577 proteins in 3326 species: Archae - 1100; Bacteria - 43606; Metazoa - 2469; Fungi - 2489; Plants - 1499; Viruses - 1; Other Eukaryotes - 17817 (source: NCBI BLink). & (reliability: 1140.0) & (original description: no original description) 0.9260481300609047 27 evm.model.tig00001155.1 no hits & (original description: no original description) 0.9232062769125846 28 evm.model.tig00000215.23 no hits & (original description: no original description) 0.9215262347312364 29 evm.model.tig00020996.29 no hits & (original description: no original description) 0.920771494927916 30 evm.model.tig00020537.69 (at4g13940 : 452.0) Encodes a S-adenosyl-L-homocysteine hydrolase required for DNA methylation-dependent gene silencing.; HOMOLOGY-DEPENDENT GENE SILENCING 1 (HOG1); FUNCTIONS IN: adenosylhomocysteinase activity; INVOLVED IN: methylation-dependent chromatin silencing, one-carbon metabolic process, posttranscriptional gene silencing, embryo development ending in seed dormancy; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 34 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-homocysteine hydrolase (InterPro:IPR000043), S-adenosyl-L-homocysteine hydrolase, conserved site (InterPro:IPR020082), NAD(P)-binding domain (InterPro:IPR016040), S-adenosyl-L-homocysteine hydrolase, NAD binding (InterPro:IPR015878); BEST Arabidopsis thaliana protein match is: S-adenosyl-l-homocysteine (SAH) hydrolase 2 (TAIR:AT3G23810.1); Has 6788 Blast hits to 6786 proteins in 1444 species: Archae - 223; Bacteria - 2243; Metazoa - 514; Fungi - 135; Plants - 203; Viruses - 0; Other Eukaryotes - 3470 (source: NCBI BLink). & (p35007|sahh_catro : 450.0) Adenosylhomocysteinase (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 904.0) & (original description: no original description) 0.919848663075022 31 evm.model.tig00000113.49 no hits & (original description: no original description) 0.9197290349745583 32 evm.model.tig00000615.81 (at3g02470 : 189.0) Encodes a S-adenosylmethionine decarboxylase involved in polyamine biosynthesis.; S-adenosylmethionine decarboxylase; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: Adenosylmethionine decarboxylase family protein (TAIR:AT5G15950.2); Has 1026 Blast hits to 1010 proteins in 271 species: Archae - 0; Bacteria - 57; Metazoa - 220; Fungi - 150; Plants - 531; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (q96471|dcam_iponi : 189.0) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] - Ipomoea nil (Japanese morning glory) (Pharbitis ni & (reliability: 378.0) & (original description: no original description) 0.9183637957569066 33 evm.model.tig00000350.8 (p49364|gcst_pea : 394.0) Aminomethyltransferase, mitochondrial precursor (EC 2.1.2.10) (Glycine cleavage system T protein) (GCVT) - Pisum sativum (Garden pea) & (at1g11860 : 382.0) Glycine cleavage T-protein family; FUNCTIONS IN: aminomethyltransferase activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycine cleavage system T protein (InterPro:IPR006223), Glycine cleavage T-protein, N-terminal (InterPro:IPR006222), Glycine cleavage T-protein, C-terminal barrel (InterPro:IPR013977); BEST Arabidopsis thaliana protein match is: Glycine cleavage T-protein family (TAIR:AT1G60990.3). & (reliability: 764.0) & (original description: no original description) 0.9180259571531743 34 evm.model.tig00021616.16 no hits & (original description: no original description) 0.9178821346086086 35 evm.model.tig00000769.13 (at3g58610 : 377.0) ketol-acid reductoisomerase; CONTAINS InterPro DOMAIN/s: Acetohydroxy acid isomeroreductase, catalytic (InterPro:IPR013116), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Acetohydroxy acid isomeroreductase C-terminal (InterPro:IPR000506), Ketol-acid reductoisomerase (InterPro:IPR016206), Acetohydroxy acid isomeroreductase (InterPro:IPR013023), NAD(P)-binding domain (InterPro:IPR016040). & (o82043|ilv5_pea : 373.0) Ketol-acid reductoisomerase, chloroplast precursor (EC 1.1.1.86) (Acetohydroxy-acid reductoisomerase) (Alpha-keto-beta-hydroxylacil reductoisomerase) - Pisum sativum (Garden pea) & (reliability: 754.0) & (original description: no original description) 0.9177314180455617 36 evm.model.tig00021070.61 no hits & (original description: no original description) 0.9173447208308385 37 evm.model.tig00020801.13 no hits & (original description: no original description) 0.9133500909466271 38 evm.model.tig00021127.109 (o80433|cisy_dauca : 129.0) Citrate synthase, mitochondrial precursor (EC 2.3.3.1) - Daucus carota (Carrot) & (at3g60100 : 127.0) citrate synthase 5 (CSY5); FUNCTIONS IN: citrate (SI)-synthase activity, transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer; INVOLVED IN: cellular carbohydrate metabolic process, tricarboxylic acid cycle; LOCATED IN: mitochondrion; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Citrate synthase-like, large alpha subdomain (InterPro:IPR016142), Citrate synthase, eukaryotic (InterPro:IPR010109), Citrate synthase-like (InterPro:IPR002020), Citrate synthase active site (InterPro:IPR019810), Citrate synthase-like, core (InterPro:IPR016141); BEST Arabidopsis thaliana protein match is: Citrate synthase family protein (TAIR:AT2G44350.1); Has 10430 Blast hits to 10424 proteins in 2755 species: Archae - 158; Bacteria - 6931; Metazoa - 258; Fungi - 314; Plants - 178; Viruses - 0; Other Eukaryotes - 2591 (source: NCBI BLink). & (reliability: 254.0) & (original description: no original description) 0.9123453200491087 39 evm.model.tig00020909.43 (q02254|ndk1_spiol : 194.0) Nucleoside diphosphate kinase 1 (EC 2.7.4.6) (Nucleoside diphosphate kinase I) (NDK I) (NDP kinase I) (NDPK I) - Spinacia oleracea (Spinach) & (at4g09320 : 180.0) nucleoside diphosphate kinase type 1 (NDPK1) gene, complete; NDPK1; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: apoplast, peroxisome, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: nucleoside diphosphate kinase 3 (TAIR:AT4G11010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 360.0) & (original description: no original description) 0.9121530407192135 40 evm.model.tig00000404.15 (at5g19750 : 111.0) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: peroxisomal membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT2G14860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 222.0) & (original description: no original description) 0.9081343670141049 41 evm.model.tig00020610.108 (at1g48850 : 381.0) embryo defective 1144 (EMB1144); FUNCTIONS IN: chorismate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chorismate synthase, conserved site (InterPro:IPR020541), Chorismate synthase (InterPro:IPR000453); BEST Arabidopsis thaliana protein match is: RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (TAIR:AT1G48860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 762.0) & (original description: no original description) 0.9080105980930977 42 evm.model.tig00001224.19 (at3g02870 : 91.3) Encodes a L-galactose-1-phosphate phosphatase, involved in ascorbate biosynthesis.; VTC4; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, L-galactose-1-phosphate phosphatase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process, L-ascorbic acid biosynthetic process, response to karrikin, response to cold, inositol biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, Lithium-sensitive (InterPro:IPR020552), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: myo-inositol monophosphatase like 1 (TAIR:AT1G31190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 182.6) & (original description: no original description) 0.9076863469978954 43 evm.model.tig00021127.110 (at2g44350 : 323.0) encodes a mitochrondrion targeted citrate synthase, the first enzyme of the tricarboxylic acid cycle, catalyzing the condensation of acetyl-CoA and oxaloacetate, finally yielding citrate and CoA.; ATCS; FUNCTIONS IN: citrate (SI)-synthase activity, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, tricarboxylic acid cycle; LOCATED IN: mitochondrion, cell wall, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Citrate synthase-like, large alpha subdomain (InterPro:IPR016142), Citrate synthase, eukaryotic (InterPro:IPR010109), Citrate synthase active site (InterPro:IPR019810), Citrate synthase-like, core (InterPro:IPR016141), Citrate synthase-like (InterPro:IPR002020); BEST Arabidopsis thaliana protein match is: citrate synthase 5 (TAIR:AT3G60100.1); Has 10608 Blast hits to 10602 proteins in 2793 species: Archae - 158; Bacteria - 6984; Metazoa - 258; Fungi - 321; Plants - 178; Viruses - 0; Other Eukaryotes - 2709 (source: NCBI BLink). & (o80433|cisy_dauca : 323.0) Citrate synthase, mitochondrial precursor (EC 2.3.3.1) - Daucus carota (Carrot) & (reliability: 646.0) & (original description: no original description) 0.9074427180354783 44 evm.model.tig00021244.17 (at5g16140 : 86.7) Peptidyl-tRNA hydrolase family protein; FUNCTIONS IN: aminoacyl-tRNA hydrolase activity; INVOLVED IN: translation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-tRNA hydrolase, conserved site (InterPro:IPR018171), Peptidyl-tRNA hydrolase (InterPro:IPR001328); BEST Arabidopsis thaliana protein match is: Peptidyl-tRNA hydrolase family protein (TAIR:AT5G38290.2); Has 7903 Blast hits to 7899 proteins in 2585 species: Archae - 0; Bacteria - 5295; Metazoa - 47; Fungi - 77; Plants - 129; Viruses - 0; Other Eukaryotes - 2355 (source: NCBI BLink). & (reliability: 173.4) & (original description: no original description) 0.9030859618901469 45 evm.model.tig00000058.10 (at5g63890 : 219.0) Encodes histidinol dehydrogenase. Up-regulated in response to UV-B.; histidinol dehydrogenase (HDH); FUNCTIONS IN: histidinol dehydrogenase activity; INVOLVED IN: response to UV, pollen development; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Histidinol dehydrogenase, conserved site (InterPro:IPR001692), Histidinol dehydrogenase, prokaryotic-type (InterPro:IPR012131); Has 9146 Blast hits to 9146 proteins in 2211 species: Archae - 179; Bacteria - 4194; Metazoa - 4; Fungi - 211; Plants - 72; Viruses - 0; Other Eukaryotes - 4486 (source: NCBI BLink). & (q5nay4|hisx_orysa : 217.0) Histidinol dehydrogenase, chloroplast precursor (EC 1.1.1.23) (HDH) - Oryza sativa (Rice) & (reliability: 438.0) & (original description: no original description) 0.902870600432689 46 evm.model.tig00001065.28 no hits & (original description: no original description) 0.9024140693039175 47 evm.model.tig00000769.14 (q01292|ilv5_spiol : 111.0) Ketol-acid reductoisomerase, chloroplast precursor (EC 1.1.1.86) (Acetohydroxy-acid reductoisomerase) (Alpha-keto-beta-hydroxylacil reductoisomerase) - Spinacia oleracea (Spinach) & (at3g58610 : 104.0) ketol-acid reductoisomerase; CONTAINS InterPro DOMAIN/s: Acetohydroxy acid isomeroreductase, catalytic (InterPro:IPR013116), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Acetohydroxy acid isomeroreductase C-terminal (InterPro:IPR000506), Ketol-acid reductoisomerase (InterPro:IPR016206), Acetohydroxy acid isomeroreductase (InterPro:IPR013023), NAD(P)-binding domain (InterPro:IPR016040). & (reliability: 208.0) & (original description: no original description) 0.9019723127391395 48 evm.model.tig00020554.62 (q9lly4|lpat1_brana : 145.0) 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplast precursor (EC 2.3.1.51) - Brassica napus (Rape) & (at4g30580 : 140.0) Encodes a plastidic lysophosphatidic acid acyltransferase (LPAAT). Is critical for chloroplasts phosphatidic acid biosynthesis. The null allele is embryo lethal.; ATS2; FUNCTIONS IN: 1-acylglycerol-3-phosphate O-acyltransferase activity, acyltransferase activity; INVOLVED IN: metabolic process, phosphatidylglycerol biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123), 1-acyl-sn-glycerol-3-phosphate acyltransferase (InterPro:IPR004552); BEST Arabidopsis thaliana protein match is: Phospholipid/glycerol acyltransferase family protein (TAIR:AT3G05510.1); Has 12571 Blast hits to 12571 proteins in 2517 species: Archae - 0; Bacteria - 9130; Metazoa - 376; Fungi - 153; Plants - 151; Viruses - 0; Other Eukaryotes - 2761 (source: NCBI BLink). & (reliability: 280.0) & (original description: no original description) 0.9015916822584065 49 evm.model.tig00021463.3 (at5g52520 : 276.0) OVULE ABORTION 6 (OVA6); FUNCTIONS IN: proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: regulation of photosynthesis, embryo sac development, seed development, tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Prolyl-tRNA synthetase, class IIa, prokaryotic-type (InterPro:IPR004499), Prolyl-tRNA synthetase, class II, C-terminal (InterPro:IPR016061), Anticodon-binding (InterPro:IPR004154), Prolyl-tRNA synthetase, class II (InterPro:IPR017449), Prolyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR002316), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT3G62120.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 552.0) & (original description: no original description) 0.8997958265142778 50 evm.model.tig00000157.47 no hits & (original description: no original description) 0.8994172887529497 55 evm.model.tig00000430.47 (q6zix2|smt1_orysa : 142.0) Cycloartenol-C-24-methyltransferase 1 (EC 2.1.1.41) (24-sterol C-methyltransferase 1) (Sterol C-methyltransferase 1) - Oryza sativa (Rice) & (at5g13710 : 138.0) SMT1 controls the level of cholesterol in plants; sterol methyltransferase 1 (SMT1); CONTAINS InterPro DOMAIN/s: Sterol methyltransferase C-terminal (InterPro:IPR013705), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: sterol methyltransferase 3 (TAIR:AT1G76090.1); Has 12253 Blast hits to 12250 proteins in 2286 species: Archae - 352; Bacteria - 8578; Metazoa - 91; Fungi - 457; Plants - 727; Viruses - 0; Other Eukaryotes - 2048 (source: NCBI BLink). & (reliability: 276.0) & (original description: no original description) 0.8983004262876679 52 evm.model.tig00000444.26 no hits & (original description: no original description) 0.8972040369276318 53 evm.model.tig00021348.4 (at1g06240 : 140.0) Protein of unknown function DUF455; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF455 (InterPro:IPR007402); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF455 (TAIR:AT5G04520.1); Has 954 Blast hits to 954 proteins in 412 species: Archae - 0; Bacteria - 697; Metazoa - 13; Fungi - 46; Plants - 75; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (reliability: 280.0) & (original description: no original description) 0.8954737991064723 54 evm.model.tig00000113.50 no hits & (original description: no original description) 0.8953903017444284 55 evm.model.tig00000037.29 no hits & (original description: no original description) 0.8951205157787074 56 evm.model.tig00000523.28 no hits & (original description: no original description) 0.8930907116686093 57 evm.model.tig00000498.8 (o49923|adk_phypa : 399.0) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine 5'-phosphotransferase) - Physcomitrella patens (Moss) & (at5g03300 : 395.0) Encodes adenosine kinase 2 (ADK2), a typical, constitutively expressed housekeeping enzyme. Shows a high sequence identity with ADK1. Involved in salvage synthesis of adenylates and methyl recycling. Enzyme activity is substantially inhibited in roots, siliques and dry seeds by an unknown compound. May contribute to cytokinin interconversion.; adenosine kinase 2 (ADK2); FUNCTIONS IN: adenosine kinase activity, copper ion binding, kinase activity; INVOLVED IN: adenosine salvage; LOCATED IN: plasma membrane; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173), Adenosine kinase (InterPro:IPR001805); BEST Arabidopsis thaliana protein match is: adenosine kinase 1 (TAIR:AT3G09820.1); Has 9730 Blast hits to 9724 proteins in 1887 species: Archae - 143; Bacteria - 5874; Metazoa - 382; Fungi - 207; Plants - 398; Viruses - 0; Other Eukaryotes - 2726 (source: NCBI BLink). & (reliability: 790.0) & (original description: no original description) 0.8924634414402105 58 evm.model.tig00021127.145 (at5g66120 : 416.0) 3-dehydroquinate synthase, putative; FUNCTIONS IN: 3-dehydroquinate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase AroB, subgroup (InterPro:IPR016037), 3-dehydroquinate synthase AroB (InterPro:IPR002658); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 832.0) & (original description: no original description) 0.8884459769760924 59 evm.model.tig00000042.218 no hits & (original description: no original description) 0.8881938656492593 60 evm.model.tig00020816.114 no hits & (original description: no original description) 0.8877291465680339 87 evm.model.tig00020943.48 no hits & (original description: no original description) 0.8876699950876763 62 evm.model.tig00020800.24 no hits & (original description: no original description) 0.8866344850461295 63 evm.model.tig00000325.9 no hits & (original description: no original description) 0.8841510504277036 64 evm.model.tig00020909.12 (at5g10480 : 142.0) Protein tyrosine phosphatase-like involved in cell division and differentiation. Interacts with CDKA;1 only in its phosphorylated form, preventing dephosphorylation. Overexpression slowed down cell division in suspension cell cultures at the G2-to-M transition and early mitosis and inhibited Arabidopsis seedling growth. Localized in the cytoplasm of dividing cells but moved into the nucleus upon cell differentiation. Based on complementation of yeast mutant PAS2 has acyl-CoA dehydratase activity. It interacts with CER10, a component of the microsomal fatty acid elongase complex, suggesting a role in synthesis of VLCFAs (very long chain fatty acids).; PASTICCINO 2 (PAS2); CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase-like, PTPLA (InterPro:IPR007482); BEST Arabidopsis thaliana protein match is: Protein-tyrosine phosphatase-like, PTPLA (TAIR:AT5G59770.1). & (reliability: 284.0) & (original description: no original description) 0.8839306717592902 65 evm.model.tig00021037.9 no hits & (original description: no original description) 0.8837887046261741 66 evm.model.tig00000204.71 no hits & (original description: no original description) 0.8834316728294075 67 evm.model.tig00001374.23 no hits & (original description: no original description) 0.8833595502612758 68 evm.model.tig00000829.21 (at1g09640 : 241.0) Translation elongation factor EF1B, gamma chain; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Translation elongation factor EF1B, gamma chain, conserved (InterPro:IPR001662), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1B, gamma chain (TAIR:AT1G57720.2). & (q6yw46|ef1g2_orysa : 237.0) Elongation factor 1-gamma 2 (EF-1-gamma 2) (eEF-1B gamma 2) - Oryza sativa (Rice) & (reliability: 482.0) & (original description: no original description) 0.8830131466848071 69 evm.model.tig00000802.50 no hits & (original description: no original description) 0.8810517829995594 99 evm.model.tig00000269.116 no hits & (original description: no original description) 0.8793963726977877 71 evm.model.tig00001215.16 no hits & (original description: no original description) 0.8793393650312616 72 evm.model.tig00020816.115 no hits & (original description: no original description) 0.8790971479630475 87 evm.model.tig00000630.52 no hits & (original description: no original description) 0.8785431216559619 74 evm.model.tig00000821.9 (at1g67730 : 151.0) Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.; beta-ketoacyl reductase 1 (KCR1); FUNCTIONS IN: oxidoreductase activity, ketoreductase activity, acetoacetyl-CoA reductase activity; INVOLVED IN: very long-chain fatty acid biosynthetic process, embryo development, cuticle development; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: beta-ketoacyl reductase 2 (TAIR:AT1G24470.1); Has 86831 Blast hits to 86679 proteins in 3373 species: Archae - 739; Bacteria - 59178; Metazoa - 5127; Fungi - 3946; Plants - 2216; Viruses - 0; Other Eukaryotes - 15625 (source: NCBI BLink). & (reliability: 302.0) & (original description: no original description) 0.8782422617724491 75 evm.model.tig00000025.47 no hits & (original description: no original description) 0.8780852574326583 79 evm.model.tig00000718.26 no hits & (original description: no original description) 0.8770236065431913 78 evm.model.tig00020616.37 no hits & (original description: no original description) 0.8769056084444797 79 evm.model.tig00000737.35 no hits & (original description: no original description) 0.8764360965512455 80 evm.model.tig00000194.55 (at5g13650 : 656.0) elongation factor family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), GTP-binding protein TypA (InterPro:IPR006298), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: elongation factor family protein (TAIR:AT2G31060.2); Has 76334 Blast hits to 67578 proteins in 6162 species: Archae - 1271; Bacteria - 47471; Metazoa - 3896; Fungi - 2458; Plants - 1891; Viruses - 1; Other Eukaryotes - 19346 (source: NCBI BLink). & (o23755|ef2_betvu : 104.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (reliability: 1312.0) & (original description: no original description) 0.8763232879690611 81 evm.model.tig00021687.4 (at2g05830 : 228.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: cellular biosynthetic process, translational initiation, cellular metabolic process; LOCATED IN: endomembrane system, eukaryotic translation initiation factor 2B complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase (InterPro:IPR005251), Initiation factor 2B related (InterPro:IPR000649), Initiation factor 2B alpha/beta/delta (InterPro:IPR011559); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT3G07300.3); Has 4761 Blast hits to 4761 proteins in 1019 species: Archae - 363; Bacteria - 1753; Metazoa - 515; Fungi - 379; Plants - 224; Viruses - 0; Other Eukaryotes - 1527 (source: NCBI BLink). & (reliability: 456.0) & (original description: no original description) 0.8761380838926753 82 evm.model.tig00000144.104 no hits & (original description: no original description) 0.8751516648258819 83 evm.model.tig00000989.26 no hits & (original description: no original description) 0.873837660586409 94 evm.model.tig00000383.102 (at5g04870 : 122.0) A calcium-dependent protein kinase that can phosphorylate phenylalanine ammonia lyase (PAL), a key enzyme in pathogen defense.; calcium dependent protein kinase 1 (CPK1); FUNCTIONS IN: protein binding, calmodulin-dependent protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: peroxisome, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calmodulin-domain protein kinase cdpk isoform 2 (TAIR:AT3G10660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p53684|cdpk3_orysa : 117.0) Calcium-dependent protein kinase, isoform 11 (EC 2.7.11.1) (CDPK 11) - Oryza sativa (Rice) & (reliability: 244.0) & (original description: no original description) 0.8734719399070439 85 evm.model.tig00020911.44 (at2g45770 : 201.0) chloroplast SRP receptor homolog, alpha subunit CPFTSY. Required for LHCP integration into isolated thylakoids.; CPFTSY; FUNCTIONS IN: GTP binding; INVOLVED IN: protein import into chloroplast thylakoid membrane, protein targeting, thylakoid membrane organization, photosynthetic electron transport in photosystem II; LOCATED IN: chloroplast, signal recognition particle, endoplasmic reticulum targeting, chloroplast thylakoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal recognition particle, SRP54 subunit, helical bundle (InterPro:IPR013822), Signal recognition particle, SRP54 subunit, GTPase (InterPro:IPR000897), Cell division transporter substrate-binding protein FtsY (InterPro:IPR004390); BEST Arabidopsis thaliana protein match is: chloroplast signal recognition particle 54 kDa subunit (TAIR:AT5G03940.1). & (reliability: 402.0) & (original description: no original description) 0.8732606138773166 86 evm.model.tig00000246.24 (at5g02250 : 142.0) Encodes a exoribonuclease involved in rRNA processing in mitochondria and chloroplasts.Loss of function mutations are pale green and require supplementation with sucrose for germination and early development. Plants are pale green due to defects in chloroplast biogenesis.; EMBRYO DEFECTIVE 2730 (EMB2730); FUNCTIONS IN: ribonuclease activity, 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: chloroplast organization, rRNA processing, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease II/R (InterPro:IPR001900); BEST Arabidopsis thaliana protein match is: ribonuclease II family protein (TAIR:AT2G17510.1); Has 7586 Blast hits to 7556 proteins in 2301 species: Archae - 41; Bacteria - 5322; Metazoa - 356; Fungi - 403; Plants - 125; Viruses - 2; Other Eukaryotes - 1337 (source: NCBI BLink). & (reliability: 284.0) & (original description: no original description) 0.8728525306652583 87 evm.model.tig00000367.22 no hits & (original description: no original description) 0.8721478721840547 88 evm.model.tig00000786.12 no hits & (original description: no original description) 0.8718178610976695 89 evm.model.tig00000325.10 no hits & (original description: no original description) 0.8717073070290662 90 evm.model.tig00000769.16 (at3g23790 : 287.0) acyl activating enzyme 16 (AAE16); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding (InterPro:IPR020459), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 15 (TAIR:AT4G14070.1); Has 72182 Blast hits to 54949 proteins in 3465 species: Archae - 1133; Bacteria - 50819; Metazoa - 2739; Fungi - 2717; Plants - 2582; Viruses - 1; Other Eukaryotes - 12191 (source: NCBI BLink). & (p17814|4cl1_orysa : 103.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Oryza sativa (Rice) & (reliability: 574.0) & (original description: no original description) 0.8691975958285518 91 evm.model.tig00000350.53 no hits & (original description: no original description) 0.8673516377085977 92 evm.model.tig00021517.15 no hits & (original description: no original description) 0.8670994312908905 93 evm.model.tig00020616.40 (at2g26350 : 110.0) Zinc-binding peroxisomal integral membrane protein (PEX10). Inserted directly from the cytosol into peroxisomes and is involved in importing proteins into the peroxisome. Required for embryogenesis.; peroxin 10 (PEX10); FUNCTIONS IN: zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, peroxisome; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Pex, N-terminal (InterPro:IPR006845), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING membrane-anchor 1 (TAIR:AT4G03510.2); Has 4616 Blast hits to 4603 proteins in 297 species: Archae - 0; Bacteria - 0; Metazoa - 2406; Fungi - 531; Plants - 966; Viruses - 101; Other Eukaryotes - 612 (source: NCBI BLink). & (reliability: 220.0) & (original description: no original description) 0.8666655797315492 94 evm.model.tig00000350.17 (at1g36180 : 1013.0) acetyl-CoA carboxylase 2 (ACC2); acetyl-CoA carboxylase 2 (ACC2); FUNCTIONS IN: acetyl-CoA carboxylase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Biotin carboxylation domain (InterPro:IPR011764), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 1 (TAIR:AT1G36160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2026.0) & (original description: no original description) 0.8664270398766475 95 evm.model.tig00000227.9 no hits & (original description: no original description) 0.8663747523759578 96 evm.model.tig00000248.26 no hits & (original description: no original description) 0.8658333535206724 98 evm.model.tig00000741.7 (at4g33020 : 90.5) member of Fe(II) transporter isolog family; ZIP9; FUNCTIONS IN: cation transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: response to zinc ion, cation transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: iron regulated transporter 3 (TAIR:AT1G60960.1); Has 1755 Blast hits to 1721 proteins in 263 species: Archae - 0; Bacteria - 88; Metazoa - 470; Fungi - 500; Plants - 517; Viruses - 0; Other Eukaryotes - 180 (source: NCBI BLink). & (reliability: 181.0) & (original description: no original description) 0.8651267571720935 99 evm.model.tig00000821.15 (at5g55580 : 82.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT1G78930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 164.0) & (original description: no original description) 0.8631362807357894 100