Sequence Description Alias PCC hrr evm.model.tig00020875.9 no hits & (original description: no original description) 0.9338563935157121 25 evm.model.tig00020800.18 no hits & (original description: no original description) 0.9288360213369294 5 evm.model.tig00000912.8 no hits & (original description: no original description) 0.9277507256891738 7 evm.model.tig00020553.146 (at1g07350 : 106.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G35785.3); Has 999351 Blast hits to 998918 proteins in 36088 species: Archae - 21775; Bacteria - 603314; Metazoa - 202027; Fungi - 24253; Plants - 55487; Viruses - 69473; Other Eukaryotes - 23022 (source: NCBI BLink). & (reliability: 199.6) & (original description: no original description) 0.9274017758943488 4 evm.model.tig00001234.18 (at5g50960 : 322.0) Highly similar to Saccharomyces cerevisiae NBP35, locus YGL091C. Cytosolic protein that homodimerizes and can assemble both 4Fe-4S - type and 2Fe-2S - type clusters on its amino terminal and carboxy therminal respectively. Null mutants are embryo lethal.; nucleotide binding protein 35 (NBP35); CONTAINS InterPro DOMAIN/s: Mrp, conserved site (InterPro:IPR000808), ATPase-like, ParA/MinD (InterPro:IPR019591); BEST Arabidopsis thaliana protein match is: IND1(iron-sulfur protein required for NADH dehydrogenase)-like (TAIR:AT4G19540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 644.0) & (original description: no original description) 0.927322875234405 7 evm.model.tig00000042.179 no hits & (original description: no original description) 0.9266573678174691 20 evm.model.tig00021070.71 no hits & (original description: no original description) 0.9264460079665099 44 evm.model.tig00021582.6 no hits & (original description: no original description) 0.9261031802352956 8 evm.model.tig00000842.8 no hits & (original description: no original description) 0.9238087073270121 9 evm.model.tig00001049.31 no hits & (original description: no original description) 0.922906324067095 14 evm.model.tig00021531.14 (at3g27380 : 319.0) One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Expressed during germination and post-germinative growth.; succinate dehydrogenase 2-1 (SDH2-1); CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Fumarate reductase, C-terminal (InterPro:IPR012285), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), Alpha-helical ferredoxin (InterPro:IPR009051), Succinate dehydrogenase/fumarate reductase iron-sulphur protein (InterPro:IPR004489); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 2-2 (TAIR:AT5G40650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 638.0) & (original description: no original description) 0.9225077812966503 11 evm.model.tig00000430.48 (at5g65930 : 336.0) encodes a novel member of the kinesin superfamily of motor proteins. recessive mutations have reduced number of trichome branches.; ZWICHEL (ZWI); CONTAINS InterPro DOMAIN/s: FERM central domain (InterPro:IPR019748), Prismane-like (InterPro:IPR011254), MyTH4 domain (InterPro:IPR000857), Kinesin, motor domain (InterPro:IPR001752), Band 4.1 domain (InterPro:IPR019749), FERM, N-terminal (InterPro:IPR018979), Kinesin, motor region, conserved site (InterPro:IPR019821), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352), FERM domain (InterPro:IPR000299); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT2G22610.2). & (p46869|fla10_chlre : 163.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 672.0) & (original description: no original description) 0.9219256944134798 30 evm.model.tig00021433.15 no hits & (original description: no original description) 0.9211756714519262 18 evm.model.tig00001333.27 (at3g50670 : 213.0) Encodes U1 snRNP 70K; U1 small nuclear ribonucleoprotein-70K (U1-70K); FUNCTIONS IN: RNA binding, nucleotide binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U1 small nuclear ribonucleoprotein of 70kDa MW N-terminal (InterPro:IPR022023), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G43370.1); Has 501 Blast hits to 501 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 126; Plants - 97; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 426.0) & (original description: no original description) 0.9210825763636106 14 evm.model.tig00021035.26 (at3g07960 : 154.0) Phosphatidylinositol-4-phosphate 5-kinase family protein; FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: phosphatidylinositol metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol- 4-phosphate 5-kinase 5 (TAIR:AT2G41210.1); Has 28977 Blast hits to 7880 proteins in 615 species: Archae - 0; Bacteria - 4479; Metazoa - 4240; Fungi - 468; Plants - 2497; Viruses - 0; Other Eukaryotes - 17293 (source: NCBI BLink). & (q6ex42|pi5k1_orysa : 145.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (reliability: 308.0) & (original description: no original description) 0.9198148089531493 45 evm.model.tig00022075.52 (at1g22300 : 265.0) Encodes a 14-3-3 protein. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1.; general regulatory factor 10 (GRF10); FUNCTIONS IN: protein phosphorylated amino acid binding, ATP binding; INVOLVED IN: brassinosteroid mediated signaling pathway; LOCATED IN: mitochondrion, chloroplast stroma, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 11 (TAIR:AT1G34760.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q96452|1433c_soybn : 263.0) 14-3-3-like protein C (SGF14C) - Glycine max (Soybean) & (reliability: 530.0) & (original description: no original description) 0.9185754264868283 17 evm.model.tig00000630.13 no hits & (original description: no original description) 0.9184367393611857 36 evm.model.tig00021098.37 no hits & (original description: no original description) 0.918042931195603 51 evm.model.tig00020629.115 no hits & (original description: no original description) 0.9141761102408863 19 evm.model.tig00020903.15 no hits & (original description: no original description) 0.9140732611388533 20 evm.model.tig00020961.96 (at5g03730 : 154.0) Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed.; CONSTITUTIVE TRIPLE RESPONSE 1 (CTR1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G24480.1); Has 126606 Blast hits to 124675 proteins in 4966 species: Archae - 112; Bacteria - 13843; Metazoa - 48138; Fungi - 11278; Plants - 33351; Viruses - 509; Other Eukaryotes - 19375 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 93.2) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 308.0) & (original description: no original description) 0.9125356349459175 84 evm.model.tig00000076.52 no hits & (original description: no original description) 0.9113894910494648 67 evm.model.tig00000342.12 no hits & (original description: no original description) 0.9106818446161364 26 evm.model.tig00001384.5 (q9sbw3|pp2a4_orysa : 503.0) Serine/threonine-protein phosphatase PP2A-4 catalytic subunit (EC 3.1.3.16) - Oryza sativa (Rice) & (at1g10430 : 498.0) Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].; protein phosphatase 2A-2 (PP2A-2); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A-2 (TAIR:AT1G59830.1); Has 6751 Blast hits to 6569 proteins in 471 species: Archae - 80; Bacteria - 183; Metazoa - 2378; Fungi - 1410; Plants - 970; Viruses - 5; Other Eukaryotes - 1725 (source: NCBI BLink). & (reliability: 996.0) & (original description: no original description) 0.9106379184782931 26 evm.model.tig00001164.14 no hits & (original description: no original description) 0.9090282937733711 25 evm.model.tig00001049.13 no hits & (original description: no original description) 0.9089137767988803 26 evm.model.tig00020965.64 no hits & (original description: no original description) 0.9083405600611204 27 evm.model.tig00020710.65 (at2g23310 : 204.0) Encodes AtRER1C1, a Golgi membrane protein involved in returning the molecules that are exported from the endoplasmic reticulum (ER) to the Golgi apparatus back to the ER (a mechanism known as retrieval). There are two Arabidopsis homologues of AtRERC1: AtRER1A and AtRER1B.; ATRER1C1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: maintenance of protein location; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: Rer1 family protein (TAIR:AT4G39220.1); Has 509 Blast hits to 509 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 154; Fungi - 147; Plants - 127; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 408.0) & (original description: no original description) 0.908274177826937 28 evm.model.tig00020553.49 no hits & (original description: no original description) 0.9068465702491673 29 evm.model.tig00021352.44 (at1g22300 : 279.0) Encodes a 14-3-3 protein. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1.; general regulatory factor 10 (GRF10); FUNCTIONS IN: protein phosphorylated amino acid binding, ATP binding; INVOLVED IN: brassinosteroid mediated signaling pathway; LOCATED IN: mitochondrion, chloroplast stroma, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 11 (TAIR:AT1G34760.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41418|14331_soltu : 273.0) 14-3-3-like protein - Solanum tuberosum (Potato) & (reliability: 558.0) & (original description: no original description) 0.9064587928762584 59 evm.model.tig00000241.181 no hits & (original description: no original description) 0.9064014751369225 31 evm.model.tig00000826.21 (at3g51470 : 136.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G33700.1); Has 7043 Blast hits to 7008 proteins in 640 species: Archae - 12; Bacteria - 714; Metazoa - 1616; Fungi - 683; Plants - 2691; Viruses - 9; Other Eukaryotes - 1318 (source: NCBI BLink). & (reliability: 272.0) & (original description: no original description) 0.9063892280197179 32 evm.model.tig00000912.28 (at2g14255 : 214.0) Ankyrin repeat family protein with DHHC zinc finger domain; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT5G20350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 81.3) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 428.0) & (original description: no original description) 0.9062808171669336 33 evm.model.tig00001130.29 no hits & (original description: no original description) 0.9055493028309431 34 evm.model.tig00020553.27 no hits & (original description: no original description) 0.9049328695722071 36 evm.model.tig00020554.143 no hits & (original description: no original description) 0.9031524836488414 37 evm.model.tig00001038.4 no hits & (original description: no original description) 0.9014573114955988 74 evm.model.tig00001408.20 no hits & (original description: no original description) 0.9008693904279136 46 evm.model.tig00000704.70 no hits & (original description: no original description) 0.9000458596733039 41 evm.model.tig00000842.19 (at1g50240 : 182.0) The FUSED (FU) gene belongs to Ser/Thr protein kinase family and has a key role in the hedgehog signaling pathway known to control cell proliferation and patterning in fruit flies and humans . Arabidopsis thaliana genome has a single Fu gene. Cytokinesis-defective mutants, which we named two-in-one (tio), result from mutations in Arabidopsis Fu. Phenotypic analysis of tio mutants reveals an essential role for TIO in conventional modes of cytokinesis in plant meristems and during male gametogenesis. TIO is tightly localized to the midline of the nascent phragmoplast and remains associated with the expanding phragmoplast ring. This gene was previously annotated as two gene models, AT1G50230.1 and AT1G50240.1, however the experimental evidence exists (Oh et al, Current Biology, 2005) showing that these two models are in fact single gene, named FUSED.; FUSED (FU); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), 26S proteasome non-ATPase regulatory subunit 5 (InterPro:IPR019538), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: serine/threonine protein kinase 2 (TAIR:AT3G08720.2); Has 138334 Blast hits to 135590 proteins in 4834 species: Archae - 164; Bacteria - 15793; Metazoa - 51363; Fungi - 13983; Plants - 33508; Viruses - 544; Other Eukaryotes - 22979 (source: NCBI BLink). & (reliability: 364.0) & (original description: no original description) 0.8990842128133207 42 evm.model.tig00021428.22 no hits & (original description: no original description) 0.8985335431386944 44 evm.model.tig00021357.62 no hits & (original description: no original description) 0.898063356048769 45 evm.model.tig00020710.120 (at2g31030 : 92.4) OSBP(oxysterol binding protein)-related protein 1B (ORP1B); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1A (TAIR:AT2G31020.1); Has 2291 Blast hits to 2240 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 1139; Fungi - 602; Plants - 285; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink). & (reliability: 184.8) & (original description: no original description) 0.897982855749656 80 evm.model.tig00001415.9 no hits & (original description: no original description) 0.8978695269962825 47 evm.model.tig00021319.38 (at2g03120 : 185.0) homologous to Signal Peptide Peptidases (SPP), required for pollen development and pollen germination. No homozygotes could be recovered from a T-DNA insertion mutant.; signal peptide peptidase (SPP); FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: pollen germination, pollen development; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 1 (TAIR:AT4G33410.1); Has 989 Blast hits to 959 proteins in 196 species: Archae - 4; Bacteria - 0; Metazoa - 468; Fungi - 136; Plants - 243; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (reliability: 370.0) & (original description: no original description) 0.8972860933389631 48 evm.model.tig00020849.11 no hits & (original description: no original description) 0.8972522335220019 49 evm.model.tig00000042.32 no hits & (original description: no original description) 0.8970976737527223 68 evm.model.tig00021339.35 no hits & (original description: no original description) 0.8968892602440983 51 evm.model.tig00020830.5 (at1g15500 : 101.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 94.7) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 202.0) & (original description: no original description) 0.8965172247371535 52 evm.model.tig00020941.34 (at3g25530 : 209.0) Encodes gamma-hydroxybutyrate dehydrogenase (AtGHBDH). Contains a NADP-binding domain. GHBDH is proposed to function in oxidative stress tolerance.; glyoxylate reductase 1 (GLYR1); FUNCTIONS IN: 3-hydroxybutyrate dehydrogenase activity, phosphogluconate dehydrogenase (decarboxylating) activity; INVOLVED IN: response to oxidative stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyisobutyrate dehydrogenase-related, conserved site (InterPro:IPR002204); BEST Arabidopsis thaliana protein match is: glyoxylate reductase 2 (TAIR:AT1G17650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 418.0) & (original description: no original description) 0.8959113723391315 53 evm.model.tig00020610.20 (p49661|copd_orysa : 166.0) Coatomer subunit delta (Delta-coat protein) (Delta-COP) (Archain) - Oryza sativa (Rice) & (at5g05010 : 164.0) clathrin adaptor complexes medium subunit family protein; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Longin-like (InterPro:IPR011012); Has 717 Blast hits to 709 proteins in 223 species: Archae - 0; Bacteria - 2; Metazoa - 237; Fungi - 248; Plants - 88; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (reliability: 328.0) & (original description: no original description) 0.8951314134638798 54 evm.model.tig00000944.45 no hits & (original description: no original description) 0.8933178036314007 56 evm.model.tig00000388.41 (at1g77350 : 87.8) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function KRTCAP2 (InterPro:IPR018614); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 175.6) & (original description: no original description) 0.8933046494869636 57 evm.model.tig00000194.58 (at3g15610 : 290.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G52730.1); Has 43706 Blast hits to 23089 proteins in 800 species: Archae - 76; Bacteria - 7357; Metazoa - 15603; Fungi - 10314; Plants - 4879; Viruses - 0; Other Eukaryotes - 5477 (source: NCBI BLink). & (reliability: 580.0) & (original description: no original description) 0.893280088576568 58 evm.model.tig00020801.75 "(at2g18040 : 117.0) phosphorylation-specific peptidyl prolyl cis/trans isomerase (PPIase) with specificity for phosphoserine-proline bonds; ""peptidylprolyl cis/trans isomerase, NIMA-interacting 1"" (PIN1AT); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, PpiC-type (InterPro:IPR000297); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT1G26550.1); Has 6394 Blast hits to 6305 proteins in 1691 species: Archae - 14; Bacteria - 4880; Metazoa - 261; Fungi - 147; Plants - 126; Viruses - 0; Other Eukaryotes - 966 (source: NCBI BLink). & (q94g00|pin1_maldo : 116.0) Peptidyl-prolyl cis-trans isomerase 1 (EC 5.2.1.8) (Rotamase Pin1) (PPIase Pin1) (MdPin1) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 234.0) & (original description: no original description)" 0.8926478719103621 89 evm.model.tig00000269.111 (at3g49660 : 123.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 118516 Blast hits to 43755 proteins in 1024 species: Archae - 92; Bacteria - 12360; Metazoa - 47439; Fungi - 25856; Plants - 15887; Viruses - 9; Other Eukaryotes - 16873 (source: NCBI BLink). & (p93340|gblp_nicpl : 114.0) Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 246.0) & (original description: no original description) 0.8923491263634792 62 evm.model.tig00001155.10 (at2g44900 : 135.0) ARABIDILLO-1 and its homolog, ARABIDILLO -2, are unique among Arabidopsis Arm-repeat proteins in having an F-box motif and fall into a phylogenetically distinct subgroup from other plant Arm-repeat proteins Similar to arm repeat protein in rice and armadillo/beta-catenin repeat family protein / F-box family protein in Dictyostelium. ARABIDILLO-1 promote lateral root development. Mutant plants form fewer lateral roots, while ARABIDILLO-1-overexpressing lines produce more lateral roots than wild-type seedlings.; ARABIDILLO-1 (ARABIDILLO-1); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: lateral root development; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARABIDILLO-2 (TAIR:AT3G60350.1); Has 10074 Blast hits to 5287 proteins in 284 species: Archae - 0; Bacteria - 24; Metazoa - 4121; Fungi - 736; Plants - 4117; Viruses - 0; Other Eukaryotes - 1076 (source: NCBI BLink). & (reliability: 258.0) & (original description: no original description) 0.8915639313742817 64 evm.model.tig00020703.9 (at2g20580 : 183.0) encoding the RPN subunits of the 26S proteasome; 26S proteasome regulatory subunit S2 1A (RPN1A); FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: regulation of cell cycle, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit (InterPro:IPR016643), Armadillo-type fold (InterPro:IPR016024), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory subunit S2 1B (TAIR:AT4G28470.1); Has 1002 Blast hits to 968 proteins in 295 species: Archae - 0; Bacteria - 4; Metazoa - 376; Fungi - 294; Plants - 141; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (reliability: 366.0) & (original description: no original description) 0.8915583813588069 65 evm.model.tig00000789.21 no hits & (original description: no original description) 0.89105537324635 83 evm.model.tig00000350.46 (q41745|lpat_maize : 133.0) 1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1 (EC 2.3.1.51) (Phospholipid synthesis protein 1) - Zea mays (Maize) & (at3g57650 : 126.0) Encodes an endoplasmic reticulum localized protein with lysophosphatidyl acyltransferase activity.; lysophosphatidyl acyltransferase 2 (LPAT2); FUNCTIONS IN: 1-acylglycerol-3-phosphate O-acyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 3 (TAIR:AT1G51260.1); Has 1646 Blast hits to 1643 proteins in 516 species: Archae - 0; Bacteria - 639; Metazoa - 536; Fungi - 213; Plants - 138; Viruses - 2; Other Eukaryotes - 118 (source: NCBI BLink). & (reliability: 252.0) & (original description: no original description) 0.891024366934607 68 evm.model.tig00000391.11 no hits & (original description: no original description) 0.8909764220835326 69 evm.model.tig00020553.52 (at1g65700 : 129.0) Small nuclear ribonucleoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649). & (reliability: 258.0) & (original description: no original description) 0.8907574587503235 70 evm.model.tig00000219.44 no hits & (original description: no original description) 0.8889144772190931 98 evm.model.tig00000237.44 no hits & (original description: no original description) 0.8884605031894176 72 evm.model.tig00000448.85 no hits & (original description: no original description) 0.8875945978167046 73 evm.model.tig00001155.18 no hits & (original description: no original description) 0.8873572986378715 74 evm.model.tig00000704.42 (at3g59870 : 150.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G43945.1); Has 292 Blast hits to 292 proteins in 84 species: Archae - 0; Bacteria - 122; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (reliability: 300.0) & (original description: no original description) 0.8872045264385188 75 evm.model.tig00020553.102 (at4g25120 : 159.0) Encodes a homolog of the yeast SRS2 (Suppressor of RAD Six-screen mutant 2) helicase. The Arabidopsis SRS2 is a functional 3í- to 5í-helicase. Biochemical studies show that SRS2 disrupts recombinogenic DNA intermediates and facilitates single strand annealing.; SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2 (SRS2); CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD-like, C-terminal (InterPro:IPR014017), Helicase, superfamily 1, UvrD-related (InterPro:IPR014016), DNA helicase, UvrD/REP type (InterPro:IPR000212); Has 26201 Blast hits to 22116 proteins in 2711 species: Archae - 259; Bacteria - 18888; Metazoa - 18; Fungi - 176; Plants - 81; Viruses - 13; Other Eukaryotes - 6766 (source: NCBI BLink). & (reliability: 318.0) & (original description: no original description) 0.8870738719230722 77 evm.model.tig00021038.84 (at3g54960 : 229.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.; PDI-like 1-3 (PDIL1-3); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to endoplasmic reticulum stress; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-4 (TAIR:AT5G60640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p52589|pdi_wheat : 225.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Triticum aestivum (Wheat) & (reliability: 458.0) & (original description: no original description) 0.8861290952043142 82 evm.model.tig00000955.23 (at5g46070 : 172.0) Guanylate-binding family protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: immune response; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Guanylate-binding protein, N-terminal (InterPro:IPR015894), Guanylate-binding protein, C-terminal (InterPro:IPR003191); BEST Arabidopsis thaliana protein match is: guanylate-binding family protein (TAIR:AT1G03830.2); Has 135716 Blast hits to 74856 proteins in 3470 species: Archae - 1642; Bacteria - 27962; Metazoa - 58309; Fungi - 11332; Plants - 7596; Viruses - 496; Other Eukaryotes - 28379 (source: NCBI BLink). & (reliability: 344.0) & (original description: no original description) 0.8860246659640404 80 evm.model.tig00020610.43 no hits & (original description: no original description) 0.8855776958662032 81 evm.model.tig00000615.8 (p28734|aatc_dauca : 404.0) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1) (Transaminase A) - Daucus carota (Carrot) & (at5g11520 : 397.0) Encodes the chloroplastic isozyme of aspartate aminotransferase. Involved in aspartate biosynthesis and nitrogen metabolism. mRNA is expressed in senescing leaves.; aspartate aminotransferase 3 (ASP3); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity; INVOLVED IN: leaf senescence, nitrogen compound metabolic process; LOCATED IN: peroxisome, plastid, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 2 (TAIR:AT5G19550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 794.0) & (original description: no original description) 0.8841757317404932 83 evm.model.tig00001154.39 no hits & (original description: no original description) 0.8834150052527046 84 evm.model.tig00020934.25 (at5g37780 : 85.5) encodes a calmodulin that is involved in thigmomorphogenesis. Gene expression is rapidly induced upon a variety of abiotic stimuli, including water spray, subirrigation, wind, touch, wounding, or darkness.; calmodulin 1 (CAM1); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 4 (TAIR:AT1G66410.1); Has 29914 Blast hits to 22079 proteins in 1723 species: Archae - 3; Bacteria - 127; Metazoa - 13080; Fungi - 6590; Plants - 6083; Viruses - 0; Other Eukaryotes - 4031 (source: NCBI BLink). & (p04464|calm_wheat : 85.5) Calmodulin (CaM) - Triticum aestivum (Wheat) & (reliability: 171.0) & (original description: no original description) 0.8811097165739944 87 evm.model.tig00001292.3 no hits & (original description: no original description) 0.8810232116741984 88 evm.model.tig00020554.80 (at4g14800 : 210.0) Encodes 20S proteasome beta subunit PBD2 (PBD2).; 20S proteasome beta subunit D2 (PBD2); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit D1 (TAIR:AT3G22630.1). & (q9lst6|psb2_orysa : 199.0) Proteasome subunit beta type 2 (EC 3.4.25.1) (20S proteasome alpha subunit D) (20S proteasome subunit beta-4) - Oryza sativa (Rice) & (reliability: 420.0) & (original description: no original description) 0.8803692496011375 91 evm.model.tig00020553.163 (at3g16060 : 454.0) ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G16630.2); Has 9813 Blast hits to 9533 proteins in 306 species: Archae - 0; Bacteria - 4; Metazoa - 4228; Fungi - 1343; Plants - 1851; Viruses - 0; Other Eukaryotes - 2387 (source: NCBI BLink). & (o23826|k125_tobac : 175.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 908.0) & (original description: no original description) 0.8797689600947272 94 evm.model.tig00020537.25 no hits & (original description: no original description) 0.8790001540453622 95 evm.model.tig00001164.12 (at3g43210 : 85.9) Encodes a kinesin TETRASPORE. Required for cytokinesis in pollen. In mutants, all four microspore nuclei remain within the same cytoplasm after meiosis.; TETRASPORE (TES); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT1G18370.1); Has 14242 Blast hits to 13167 proteins in 521 species: Archae - 65; Bacteria - 318; Metazoa - 6487; Fungi - 1661; Plants - 2059; Viruses - 3; Other Eukaryotes - 3649 (source: NCBI BLink). & (reliability: 171.8) & (original description: no original description) 0.8788308358045851 97 evm.model.tig00000600.10 (at5g61460 : 294.0) Encodes SMC6B (STRUCTURAL MAINTENANCE OF CHROMOSOMES 6B), a component of the SMC5/6 complex. SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage.; hypersensitive to MMS, irradiation and MMC (MIM); FUNCTIONS IN: ATP binding; INVOLVED IN: double-strand break repair, sister chromatid cohesion, chromosome segregation, response to X-ray, double-strand break repair via homologous recombination; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 6A (TAIR:AT5G07660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 588.0) & (original description: no original description) 0.8785379796713332 98