Sequence Description Alias PCC hrr evm.model.tig00000144.176 (at3g57560 : 211.0) encodes a N-acetylglutamate kinase, involved in arginine biosynthesis; N-acetyl-l-glutamate kinase (NAGK); FUNCTIONS IN: acetylglutamate kinase activity; INVOLVED IN: arginine biosynthetic process via ornithine, arginine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: N-acetylglutamate kinase (InterPro:IPR011148), Glutamate 5-kinase (InterPro:IPR001057), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Acetylglutamate kinase (InterPro:IPR004662); BEST Arabidopsis thaliana protein match is: N-acetyl-l-glutamate synthase 2 (TAIR:AT4G37670.2); Has 9387 Blast hits to 9387 proteins in 2227 species: Archae - 281; Bacteria - 6131; Metazoa - 9; Fungi - 140; Plants - 140; Viruses - 0; Other Eukaryotes - 2686 (source: NCBI BLink). & (reliability: 422.0) & (original description: no original description) 0.9098734710293575 32 evm.model.tig00001154.6 (at4g22670 : 106.0) HSP70-interacting protein 1 (HIP1); FUNCTIONS IN: binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetraticopeptide domain-containing thioredoxin (TAIR:AT3G17880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 206.0) & (original description: no original description) 0.9058910390908672 7 evm.model.tig00021281.27 no hits & (original description: no original description) 0.9023801929719659 30 evm.model.tig00000692.26 no hits & (original description: no original description) 0.9019616433716091 39 evm.model.tig00020554.136 no hits & (original description: no original description) 0.8996800350633887 75 evm.model.tig00000455.24 no hits & (original description: no original description) 0.8990675010611323 56 evm.model.tig00000849.4 no hits & (original description: no original description) 0.8983032988298449 31 evm.model.tig00020510.43 no hits & (original description: no original description) 0.8975783767157315 70 evm.model.tig00000655.43 no hits & (original description: no original description) 0.8972821870152867 93 evm.model.tig00021489.11 (at3g08730 : 246.0) Encodes a protein-serine kinase that phosphorylates ribosomal protein in vitro. Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Involved in translational up-regulation of ribosomal proteins. Phosphorylated by PDK1. Interacts with RAPTOR1, which in turn interacts with TOR. SPK6 activity is affected by osmotic stress, and plants overexpressing S6k1 are hypersensitive to osmotic stress. The gene is expressed in all tissues examined, with highest expression level detected in metabolically active tissues.; protein-serine kinase 1 (PK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: serine/threonine protein kinase 2 (TAIR:AT3G08720.2); Has 134224 Blast hits to 132007 proteins in 4588 species: Archae - 200; Bacteria - 15979; Metazoa - 48799; Fungi - 13454; Plants - 32927; Viruses - 586; Other Eukaryotes - 22279 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 172.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 492.0) & (original description: no original description) 0.8952037732552213 30 evm.model.tig00020878.25 no hits & (original description: no original description) 0.894924788794592 34 evm.model.tig00021070.11 (at4g19645 : 102.0) TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT1G31300.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description) 0.893264475588543 43 evm.model.tig00021127.88 no hits & (original description: no original description) 0.891227313468701 13 evm.model.tig00021435.46 no hits & (original description: no original description) 0.8909353512419613 78 evm.model.tig00000754.29 (p31022|rab7_pea : 311.0) Ras-related protein Rab7 - Pisum sativum (Garden pea) & (at3g16100 : 303.0) RAB GTPase homolog G3C (RABG3c); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3D (TAIR:AT1G52280.1); Has 25544 Blast hits to 25522 proteins in 774 species: Archae - 27; Bacteria - 219; Metazoa - 13379; Fungi - 3488; Plants - 2822; Viruses - 20; Other Eukaryotes - 5589 (source: NCBI BLink). & (reliability: 606.0) & (original description: no original description) 0.8893886854899565 63 evm.model.tig00021318.29 no hits & (original description: no original description) 0.8892953573208552 18 evm.model.tig00000254.114 (q6zl94|suca_orysa : 376.0) Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase subunit alpha) (SCS-alpha) - Oryza sativa (Rice) & (at5g08300 : 360.0) Succinyl-CoA ligase, alpha subunit; FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding, metal ion binding; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: mitochondrion, cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), CoA-binding (InterPro:IPR003781), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: Succinyl-CoA ligase, alpha subunit (TAIR:AT5G23250.1); Has 9706 Blast hits to 9705 proteins in 2093 species: Archae - 338; Bacteria - 4848; Metazoa - 444; Fungi - 287; Plants - 143; Viruses - 0; Other Eukaryotes - 3646 (source: NCBI BLink). & (reliability: 720.0) & (original description: no original description) 0.8872626885154898 56 evm.model.tig00020610.28 no hits & (original description: no original description) 0.8856174253726947 82 evm.model.tig00000444.6 no hits & (original description: no original description) 0.8841296627950403 80 evm.model.tig00020816.3 (original description: no original description) 0.8826194540469042 25 evm.model.tig00000178.72 no hits & (original description: no original description) 0.8782954283247746 92 evm.model.tig00021537.24 "(at2g30260 : 213.0) encodes U2B"", which is a component of the U2 snRNP complex. Its precise role in pre-mRNA splicing is still unknown. It has been suggested that U2B0 may not be required for the splicing reaction itself but may have a role in U2 snRNP biogenesis. Deletion analysis of the U2B0 gene fusion has identified the N-terminal RNP-80 motif as sufficient for localization to the coiled body and the nucleus.; U2 small nuclear ribonucleoprotein B (U2B''); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: cis assembly of pre-catalytic spliceosome; LOCATED IN: nucleoplasm, Cajal body, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G06960.1); Has 1885 Blast hits to 1858 proteins in 260 species: Archae - 0; Bacteria - 2; Metazoa - 926; Fungi - 414; Plants - 327; Viruses - 1; Other Eukaryotes - 215 (source: NCBI BLink). & (reliability: 426.0) & (original description: no original description)" 0.8778233366550259 48 evm.model.tig00000237.8 no hits & (original description: no original description) 0.8774945532696056 54 evm.model.tig00000383.114 no hits & (original description: no original description) 0.8761551197417757 69 evm.model.tig00021123.29 no hits & (original description: no original description) 0.8756115188099616 53 evm.model.tig00000754.8 (at1g16320 : 89.7) Uncharacterized conserved protein (DUF2358); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); BEST Arabidopsis thaliana protein match is: Uncharacterized conserved protein (DUF2358) (TAIR:AT1G79510.2); Has 274 Blast hits to 274 proteins in 79 species: Archae - 0; Bacteria - 78; Metazoa - 80; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 179.4) & (original description: no original description) 0.8737996656486274 46 evm.model.tig00000388.14 no hits & (original description: no original description) 0.8731930539142488 36 evm.model.tig00001130.29 no hits & (original description: no original description) 0.8728156825130964 69 evm.model.tig00020531.6 no hits & (original description: no original description) 0.870874965846579 42 evm.model.tig00020996.30 no hits & (original description: no original description) 0.8700138292258279 72 evm.model.tig00020904.44 (at5g51300 : 80.1) splicing factor-related; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), RNA recognition motif, RNP-1 (InterPro:IPR000504), K Homology, type 1 (InterPro:IPR004088), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G09660.1); Has 82686 Blast hits to 53020 proteins in 1818 species: Archae - 38; Bacteria - 8214; Metazoa - 37936; Fungi - 14163; Plants - 12444; Viruses - 1255; Other Eukaryotes - 8636 (source: NCBI BLink). & (reliability: 160.2) & (original description: no original description) 0.8669372829786405 97 evm.model.tig00000863.52 no hits & (original description: no original description) 0.8664287485946576 85 evm.model.tig00021582.19 (q6x4a2|cipk1_orysa : 84.7) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (at4g14580 : 84.3) CBL-interacting protein kinase; CBL-interacting protein kinase 4 (CIPK4); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 7 (TAIR:AT3G23000.1); Has 128256 Blast hits to 126264 proteins in 4408 species: Archae - 175; Bacteria - 15086; Metazoa - 46975; Fungi - 12948; Plants - 31367; Viruses - 524; Other Eukaryotes - 21181 (source: NCBI BLink). & (reliability: 168.6) & (original description: no original description) 0.8592398803020845 85 evm.model.tig00000912.34 no hits & (original description: no original description) 0.8518735375782461 86 evm.model.tig00000863.50 no hits & (original description: no original description) 0.8470538907373145 81 evm.model.tig00021127.16 (at1g18100 : 80.1) Encodes a member of the FT and TFL1 family of phosphatidylethanolamine-binding proteins. It is expressed in seeds and up-regulated in response to ABA. Loss of function mutants show decreased rate of germination in the presence of ABA. ABA dependent regulation is mediated by both ABI3 and ABI5. ABI5 promotes MFT expression, primarily in the radicle-hypocotyl transition zone and ABI3 suppresses it in the seed.; E12A11; CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: PEBP (phosphatidylethanolamine-binding protein) family protein (TAIR:AT5G03840.1); Has 2417 Blast hits to 2417 proteins in 371 species: Archae - 0; Bacteria - 118; Metazoa - 639; Fungi - 192; Plants - 1429; Viruses - 3; Other Eukaryotes - 36 (source: NCBI BLink). & (reliability: 160.2) & (original description: no original description) 0.8462624686634795 88 evm.model.tig00020961.48 no hits & (original description: no original description) 0.8434259292636797 94 evm.model.tig00000792.34 (at1g50320 : 84.0) encodes a prokaryotic thioredoxin; thioredoxin X (THX); FUNCTIONS IN: enzyme activator activity; INVOLVED IN: positive regulation of catalytic activity; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin Y1 (TAIR:AT1G76760.1); Has 20779 Blast hits to 19654 proteins in 2968 species: Archae - 276; Bacteria - 11383; Metazoa - 2412; Fungi - 1075; Plants - 1697; Viruses - 7; Other Eukaryotes - 3929 (source: NCBI BLink). & (reliability: 168.0) & (original description: no original description) 0.8426604477387553 100 evm.model.tig00001371.6 (at1g01140 : 315.0) Encodes a CBL-interacting protein kinase with similarity to SOS2; CBL-interacting protein kinase 9 (CIPK9); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 23 (TAIR:AT1G30270.1); Has 130572 Blast hits to 128490 proteins in 4426 species: Archae - 165; Bacteria - 15544; Metazoa - 48044; Fungi - 13206; Plants - 31490; Viruses - 522; Other Eukaryotes - 21601 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 293.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 630.0) & (original description: no original description) 0.842561286424224 99