Sequence Description Alias PCC hrr evm.model.tig00020961.28 (at4g35740 : 303.0) Encodes RECQ3, an ATP-dependent helicase.; RecQl3; FUNCTIONS IN: ATP binding, ATP-dependent helicase activity; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 28158 Blast hits to 28089 proteins in 2765 species: Archae - 286; Bacteria - 16813; Metazoa - 3341; Fungi - 2669; Plants - 1491; Viruses - 10; Other Eukaryotes - 3548 (source: NCBI BLink). & (p46942|db10_nicsy : 90.5) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 580.0) & (original description: no original description) 0.958967296693725 15 evm.model.tig00020849.8 no hits & (original description: no original description) 0.9575623996062175 7 evm.model.tig00000480.44 no hits & (original description: no original description) 0.951921265474623 15 evm.model.tig00000254.117 no hits & (original description: no original description) 0.9499736681697563 13 evm.model.tig00000692.52 no hits & (original description: no original description) 0.9488142275593198 56 evm.model.tig00021489.49 no hits & (original description: no original description) 0.9486388077254816 45 evm.model.tig00020723.89 no hits & (original description: no original description) 0.9480669015882947 17 evm.model.tig00000498.82 no hits & (original description: no original description) 0.9450113547814752 8 evm.model.tig00020537.80 no hits & (original description: no original description) 0.9449700957640309 52 evm.model.tig00000545.28 (at5g17410 : 387.0) Spc97 / Spc98 family of spindle pole body (SBP) component; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: spindle pole body component 98 (TAIR:AT5G06680.1); Has 1351 Blast hits to 1243 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 645; Fungi - 324; Plants - 181; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (reliability: 774.0) & (original description: no original description) 0.9391942378332059 69 evm.model.tig00021612.54 no hits & (original description: no original description) 0.9391500857487137 59 evm.model.tig00020537.14 (at1g04020 : 90.1) Encodes a protein containing two tandem BRCA1 C-Terminal (BRCT) domains, which function in phosphorylation-dependent proteinñprotein interactions.Loss of function mutations cause defects in meristem organization due to failure to repress WUS. BARD1 binds to WUS promoter and over expression of BARD reduces the extent of WUS expression.; breast cancer associated RING 1 (BARD1); FUNCTIONS IN: transcription coactivator activity, DNA binding; INVOLVED IN: DNA repair, regulation of meristem structural organization, leaf development; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: breast cancer susceptibility1 (TAIR:AT4G21070.1); Has 6045 Blast hits to 5706 proteins in 320 species: Archae - 0; Bacteria - 47; Metazoa - 4577; Fungi - 362; Plants - 542; Viruses - 11; Other Eukaryotes - 506 (source: NCBI BLink). & (reliability: 180.2) & (original description: no original description) 0.937773359622505 73 evm.model.tig00001636.4 no hits & (original description: no original description) 0.9375270096849377 43 evm.model.tig00000147.27 no hits & (original description: no original description) 0.935586990635373 56 evm.model.tig00000157.74 no hits & (original description: no original description) 0.9355413465463133 58 evm.model.tig00020710.116 no hits & (original description: no original description) 0.9354073707494279 65 evm.model.tig00020675.29 no hits & (original description: no original description) 0.9344189881744898 17 evm.model.tig00020616.20 no hits & (original description: no original description) 0.934288828508008 54 evm.model.tig00020961.145 (at4g15890 : 81.3) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chromosome condensation protein, HCP-6-related (InterPro:IPR012371), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT3G57060.1); Has 443 Blast hits to 428 proteins in 158 species: Archae - 0; Bacteria - 0; Metazoa - 188; Fungi - 128; Plants - 61; Viruses - 3; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 162.6) & (original description: no original description) 0.9338113966436878 34 evm.model.tig00020961.65 no hits & (original description: no original description) 0.933765936508681 61 evm.model.tig00001299.12 (at4g31400 : 91.7) Encodes CTF7, a homolog of the yeast CTF protein required for the formation of sister chromatid cohesion. Arabidopsis CTF7 is similar to Saccharomyces cerevisiae CTF7 in that it lacks an N-terminal extension, exhibits acetyltransferase activity, and can complement a yeast ctf7 temperature-sensitive mutation. Arabidopsis CTF7 is critical for female gametophyte and embryo development, but not for the establishment of mitotic cohesion during microgametogenesis or during endosperm development.; CTF7; FUNCTIONS IN: damaged DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: sister chromatid cohesion, embryo sac development, embryo development; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA-repair protein, UmuC-like (InterPro:IPR001126); Has 328 Blast hits to 327 proteins in 141 species: Archae - 0; Bacteria - 2; Metazoa - 149; Fungi - 104; Plants - 43; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 183.4) & (original description: no original description) 0.9326457144520874 75 evm.model.tig00001265.8 no hits & (original description: no original description) 0.932326169030307 85 evm.model.tig00000139.19 no hits & (original description: no original description) 0.9319420716824905 50 evm.model.tig00020610.90 no hits & (original description: no original description) 0.9319118733967746 24 evm.model.tig00000076.67 (at1g44110 : 156.0) Cyclin A1;1 (CYCA1;1); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: CYCLIN A1;2 (TAIR:AT1G77390.1); Has 4548 Blast hits to 4417 proteins in 376 species: Archae - 0; Bacteria - 4; Metazoa - 1999; Fungi - 561; Plants - 1168; Viruses - 34; Other Eukaryotes - 782 (source: NCBI BLink). & (p30278|ccnb2_medsa : 124.0) G2/mitotic-specific cyclin-2 (B-like cyclin) (CycMs2) (Fragment) - Medicago sativa (Alfalfa) & (reliability: 312.0) & (original description: no original description) 0.9318488674234527 50 evm.model.tig00001030.24 (at5g19820 : 80.1) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 160.2) & (original description: no original description) 0.9301185094398919 33 evm.model.tig00000241.85 no hits & (original description: no original description) 0.9289794665776445 34 evm.model.tig00000903.14 no hits & (original description: no original description) 0.9286377522192164 45 evm.model.tig00020830.65 (at5g38110 : 204.0) This gene is predicted to encode a silencing group A protein. Plant lines expressing RNAi constructs directed against SGA1 have reduced levels of agrobacterium-mediated root transformation.; anti- silencing function 1b (ASF1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: DNA mediated transformation, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Histone chaperone, ASF1-like (InterPro:IPR006818); BEST Arabidopsis thaliana protein match is: ASF1 like histone chaperone (TAIR:AT1G66740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 408.0) & (original description: no original description) 0.9283649677114943 29 evm.model.tig00000405.22 no hits & (original description: no original description) 0.9279663932649574 89 evm.model.tig00021035.22 no hits & (original description: no original description) 0.9272453856956769 68 evm.model.tig00000403.40 (at1g29630 : 229.0) 5'-3' exonuclease family protein; FUNCTIONS IN: DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G18090.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 458.0) & (original description: no original description) 0.9268180951574524 43 evm.model.tig00000133.39 no hits & (original description: no original description) 0.926356513045717 33 evm.model.tig00000989.31 no hits & (original description: no original description) 0.9262090874698947 76 evm.model.tig00020554.148 (at3g17360 : 279.0) PHRAGMOPLAST ORIENTING KINESIN 1 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK1 constructs were more limited than those for POK2; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls.; phragmoplast orienting kinesin 1 (POK1); FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: cytokinesis; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast orienting kinesin 2 (TAIR:AT3G19050.1); Has 97051 Blast hits to 52483 proteins in 2606 species: Archae - 1597; Bacteria - 13842; Metazoa - 45578; Fungi - 8395; Plants - 6409; Viruses - 244; Other Eukaryotes - 20986 (source: NCBI BLink). & (p46869|fla10_chlre : 234.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 558.0) & (original description: no original description) 0.9258687948651378 89 evm.model.tig00000615.44 (at5g16270 : 116.0) Encodes a SCC1/REC8 ortholog that may be involved in mitosis and may represent a mitotic cohesin.; sister chromatid cohesion 1 protein 4 (SYN4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: sister chromatid cohesion; LOCATED IN: nuclear chromosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rad21/Rec8 like protein, C-terminal (InterPro:IPR006909), Rad21/Rec8 like protein, N-terminal (InterPro:IPR006910); BEST Arabidopsis thaliana protein match is: Rad21/Rec8-like family protein (TAIR:AT3G59550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 232.0) & (original description: no original description) 0.9253055811535242 41 evm.model.tig00021098.37 no hits & (original description: no original description) 0.9252698949741335 38 evm.model.tig00020537.22 no hits & (original description: no original description) 0.9245681029904813 73 evm.model.tig00020614.39 (at3g19210 : 499.0) Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases. Functions in DNA repair via homologous recombination.; homolog of RAD54 (RAD54); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: DNA repair, response to gamma radiation, double-strand break repair via homologous recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: style (sensu Poaceae), hydathode, root, petiole; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: switch 2 (TAIR:AT1G03750.1). & (q7g8y3|isw2_orysa : 192.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 998.0) & (original description: no original description) 0.9243751649770882 44 evm.model.tig00021348.12 (at2g20000 : 287.0) Required for cell division and cell differentiation in meristems. Encodes a homolog of the CDC27 subunit of the anaphase-promoting complex (APC). Unlike other CDC27 homologs in Arabidopsis, its transcription is cell cycle regulated. Strong hbt mutants give rise to seedlings that lack an anatomically recognizable quiescent center and differentiated columella root cap cells, the cell types derived from the wild-type hypophysis. Furthermore, they have no mitotically active root meristem and lack a differentiated lateral root cap.; HOBBIT (HBT); FUNCTIONS IN: binding; INVOLVED IN: in 10 processes; LOCATED IN: anaphase-promoting complex, nucleus, cell plate, spindle; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G16320.1); Has 19127 Blast hits to 10740 proteins in 1344 species: Archae - 1126; Bacteria - 9300; Metazoa - 1888; Fungi - 782; Plants - 572; Viruses - 0; Other Eukaryotes - 5459 (source: NCBI BLink). & (reliability: 574.0) & (original description: no original description) 0.9234420566418509 68 evm.model.tig00000852.10 no hits & (original description: no original description) 0.9214143918375901 99 evm.model.tig00020902.44 no hits & (original description: no original description) 0.9205949566642098 53 evm.model.tig00000692.44 no hits & (original description: no original description) 0.920520701082059 56 evm.model.tig00021072.44 no hits & (original description: no original description) 0.9200156568197458 87 evm.model.tig00000042.231 (o81263|kith_orysa : 138.0) Thymidine kinase (EC 2.7.1.21) - Oryza sativa (Rice) & (at5g23070 : 136.0) Thymidine kinase; FUNCTIONS IN: thymidine kinase activity, ATP binding; INVOLVED IN: pyrimidine deoxyribonucleoside interconversion, anaerobic respiration; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidine kinase (InterPro:IPR001267), Thymidine kinase, conserved site (InterPro:IPR020633); BEST Arabidopsis thaliana protein match is: Thymidine kinase (TAIR:AT3G07800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) & (original description: no original description) 0.9199464113810459 95 evm.model.tig00000076.52 no hits & (original description: no original description) 0.919619375219116 49 evm.model.tig00020800.19 no hits & (original description: no original description) 0.9168713137211629 98 evm.model.tig00021435.12 (at5g27410 : 88.6) D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT3G05190.1). & (reliability: 177.2) & (original description: no original description) 0.9154522623214052 52 evm.model.tig00020801.34 no hits & (original description: no original description) 0.9136880759005783 87 evm.model.tig00020563.149 no hits & (original description: no original description) 0.9136789640890479 57 evm.model.tig00020616.19 no hits & (original description: no original description) 0.9136036598797527 58 evm.model.tig00020703.36 (at4g09020 : 324.0) Encodes an isoamylase-like protein. Mutant studies show that the gene is strongly involved in starch breakdown. A GUS-protein fusion product was shown to localize to the surface of chloroplastic structures reminiscent of starch granules. In the mutants, the chloroplastic α-amylase AMY3 is upregulated.; isoamylase 3 (ISA3); FUNCTIONS IN: isoamylase activity, alpha-amylase activity; INVOLVED IN: carbohydrate metabolic process, starch catabolic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast starch grain; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Immunoglobulin-like fold (InterPro:IPR013783), Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: isoamylase 1 (TAIR:AT2G39930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 648.0) & (original description: no original description) 0.9135656925325806 66 evm.model.tig00021036.12 no hits & (original description: no original description) 0.9133634434410618 88 evm.model.tig00021127.68 no hits & (original description: no original description) 0.9132964523675053 73 evm.model.tig00000430.48 (at5g65930 : 336.0) encodes a novel member of the kinesin superfamily of motor proteins. recessive mutations have reduced number of trichome branches.; ZWICHEL (ZWI); CONTAINS InterPro DOMAIN/s: FERM central domain (InterPro:IPR019748), Prismane-like (InterPro:IPR011254), MyTH4 domain (InterPro:IPR000857), Kinesin, motor domain (InterPro:IPR001752), Band 4.1 domain (InterPro:IPR019749), FERM, N-terminal (InterPro:IPR018979), Kinesin, motor region, conserved site (InterPro:IPR019821), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352), FERM domain (InterPro:IPR000299); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT2G22610.2). & (p46869|fla10_chlre : 163.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 672.0) & (original description: no original description) 0.9129635802113807 62 evm.model.tig00020903.11 no hits & (original description: no original description) 0.9129000948538365 86 evm.model.tig00020995.12 no hits & (original description: no original description) 0.9120389182000069 66 evm.model.tig00000806.37 no hits & (original description: no original description) 0.9114818890876196 69 evm.model.tig00020911.67 (at2g27600 : 97.1) Encodes a SKD1 (Suppressor of K+ Transport Growth Defect1) homolog. Localized to the cytoplasm and to multivesicular endosomes. Involved in multivesicular endosome function.; SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1 (SKD1); FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: vesicle-mediated transport, endosome organization; LOCATED IN: cytoplasm, multivesicular body; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Vps4 oligomerisation, C-terminal (InterPro:IPR015415), MIT (InterPro:IPR007330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G80350.1); Has 30691 Blast hits to 28172 proteins in 3117 species: Archae - 1476; Bacteria - 10868; Metazoa - 5113; Fungi - 3519; Plants - 2854; Viruses - 27; Other Eukaryotes - 6834 (source: NCBI BLink). & (reliability: 194.2) & (original description: no original description) 0.911238401635015 71 evm.model.tig00021318.39 no hits & (original description: no original description) 0.9098111065624831 83 evm.model.tig00001024.7 no hits & (original description: no original description) 0.9095270126501361 78 evm.model.tig00000767.30 no hits & (original description: no original description) 0.908764348343089 81 evm.model.tig00000489.8 (at2g39090 : 95.1) tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: anaphase-promoting complex subunit 8 (TAIR:AT3G48150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 190.2) & (original description: no original description) 0.9082474405721359 82 evm.model.tig00021318.67 (at5g47010 : 96.3) Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb- amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes.; LOW-LEVEL BETA-AMYLASE 1 (LBA1); FUNCTIONS IN: in 6 functions; INVOLVED IN: sugar mediated signaling pathway, RNA interference, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, response to sucrose stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), RNA helicase UPF1, UPF2-interacting domain (InterPro:IPR018999); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1); Has 9640 Blast hits to 8330 proteins in 1330 species: Archae - 182; Bacteria - 2840; Metazoa - 3001; Fungi - 1369; Plants - 807; Viruses - 148; Other Eukaryotes - 1293 (source: NCBI BLink). & (reliability: 192.6) & (original description: no original description) 0.9067364554550996 85 evm.model.tig00020563.196 (original description: no original description) 0.9066399215335255 92 evm.model.tig00000237.48 (at2g04660 : 239.0) a highly conserved ubiquitin-protein ligase involved in cell cycle regulation; anaphase-promoting complex/cyclosome 2 (APC2); FUNCTIONS IN: ubiquitin-protein ligase activity, ubiquitin protein ligase binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cullin homology (InterPro:IPR016158), Anaphase promoting complex subunit 2 (InterPro:IPR014786), Cullin, N-terminal (InterPro:IPR001373); BEST Arabidopsis thaliana protein match is: cullin4 (TAIR:AT5G46210.1); Has 1400 Blast hits to 1393 proteins in 217 species: Archae - 0; Bacteria - 0; Metazoa - 534; Fungi - 454; Plants - 255; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (reliability: 478.0) & (original description: no original description) 0.9065793275004644 87 evm.model.tig00000882.29 no hits & (original description: no original description) 0.9041620798967658 93 evm.model.tig00021070.71 no hits & (original description: no original description) 0.9028705305415117 95 evm.model.tig00001374.22 no hits & (original description: no original description) 0.9025631963700647 96 evm.model.tig00020554.132 no hits & (original description: no original description) 0.9025063518635591 97 evm.model.tig00000391.11 no hits & (original description: no original description) 0.9017895140626443 99