Sequence Description Alias PCC hrr evm.model.tig00021616.22 no hits & (original description: no original description) 0.9560224052987327 3 evm.model.tig00001388.4 (p05434|catr_chlre : 177.0) Caltractin (Centrin) (20 kDa calcium-binding protein) - Chlamydomonas reinhardtii & (at3g50360 : 148.0) centrin2 (CEN2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: centrin 2 (TAIR:AT4G37010.2); Has 32825 Blast hits to 20606 proteins in 1695 species: Archae - 1; Bacteria - 190; Metazoa - 13563; Fungi - 7187; Plants - 7027; Viruses - 2; Other Eukaryotes - 4855 (source: NCBI BLink). & (reliability: 296.0) & (original description: no original description) 0.9503307103931228 9 evm.model.tig00000789.43 no hits & (original description: no original description) 0.9417439413259892 6 evm.model.tig00000737.2 (original description: no original description) 0.929781747721246 27 evm.model.tig00020554.144 no hits & (original description: no original description) 0.9292477710247665 27 evm.model.tig00020918.3 no hits & (original description: no original description) 0.9286041353651107 9 evm.model.tig00020610.77 no hits & (original description: no original description) 0.9273390796816274 7 evm.model.tig00000551.18 no hits & (original description: no original description) 0.9200263951297707 28 evm.model.tig00020965.24 no hits & (original description: no original description) 0.9198929864715631 9 evm.model.tig00000692.24 no hits & (original description: no original description) 0.9140108311591998 15 evm.model.tig00000310.31 no hits & (original description: no original description) 0.9130942377228575 25 evm.model.tig00000144.169 no hits & (original description: no original description) 0.91223712572692 12 evm.model.tig00001073.12 (original description: no original description) 0.9114309135798444 42 evm.model.tig00000042.31 no hits & (original description: no original description) 0.9113904927171848 19 evm.model.tig00021435.22 no hits & (original description: no original description) 0.9109878133354841 15 evm.model.tig00000388.24 no hits & (original description: no original description) 0.9102373085360008 30 evm.model.tig00000411.74 no hits & (original description: no original description) 0.9091554092164918 25 evm.model.tig00021357.40 (at1g16470 : 295.0) Encodes 20S proteasome subunit PAB1 (PAB1).; proteasome subunit PAB1 (PAB1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to zinc ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT1G79210.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9lsu2|psa2_orysa : 288.0) Proteasome subunit alpha type 2 (EC 3.4.25.1) (20S proteasome alpha subunit B) (20S proteasome subunit alpha-2) - Oryza sativa (Rice) & (reliability: 590.0) & (original description: no original description) 0.9076984473896874 26 evm.model.tig00000944.55 no hits & (original description: no original description) 0.9055970633667277 69 evm.model.tig00000507.11 (at3g10850 : 103.0) glyoxalase II cytoplasmic isozyme (Glx2-2) mRNA, complete; GLY2; FUNCTIONS IN: hydroxyacylglutathione hydrolase activity; INVOLVED IN: methylglyoxal catabolic process to D-lactate; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279), Hydroxyacylglutathione hydrolase (InterPro:IPR017782); BEST Arabidopsis thaliana protein match is: glyoxalase 2-4 (TAIR:AT1G06130.2); Has 13211 Blast hits to 13207 proteins in 2289 species: Archae - 256; Bacteria - 8297; Metazoa - 430; Fungi - 311; Plants - 206; Viruses - 0; Other Eukaryotes - 3711 (source: NCBI BLink). & (reliability: 206.0) & (original description: no original description) 0.9049488101923479 20 evm.model.tig00000829.15 no hits & (original description: no original description) 0.9047699014903908 25 evm.model.tig00021435.47 (at3g43810 : 276.0) EF hand domain protein encodes a calmodulin. Can functionally complement a yeast CaM mutant.; calmodulin 7 (CAM7); FUNCTIONS IN: calcium ion binding; INVOLVED IN: detection of calcium ion, calcium-mediated signaling, regulation of photomorphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 5 (TAIR:AT2G27030.3); Has 33955 Blast hits to 23167 proteins in 1763 species: Archae - 4; Bacteria - 223; Metazoa - 14467; Fungi - 7347; Plants - 6966; Viruses - 0; Other Eukaryotes - 4948 (source: NCBI BLink). & (p17928|calm_medsa : 275.0) Calmodulin (CaM) - Medicago sativa (Alfalfa) & (reliability: 552.0) & (original description: no original description) 0.9029153452638832 67 evm.model.tig00020610.76 no hits & (original description: no original description) 0.9021998470912187 45 evm.model.tig00020903.37 no hits & (original description: no original description) 0.901703789363378 25 evm.model.tig00000808.43 (at1g56450 : 253.0) 20S proteasome beta subunit PBG1 (PBG1) mRNA, complete cds; 20S proteasome beta subunit G1 (PBG1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, response to salt stress, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome endopeptidase complex, beta subunit (InterPro:IPR016295), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT4G31300.2); Has 2530 Blast hits to 2530 proteins in 413 species: Archae - 597; Bacteria - 46; Metazoa - 632; Fungi - 578; Plants - 277; Viruses - 0; Other Eukaryotes - 400 (source: NCBI BLink). & (reliability: 506.0) & (original description: no original description) 0.9013618187882717 49 evm.model.tig00000217.36 no hits & (original description: no original description) 0.9012278451000012 31 evm.model.tig00001331.7 no hits & (original description: no original description) 0.9010148713267274 33 evm.model.tig00001424.6 no hits & (original description: no original description) 0.9008670870107665 28 evm.model.tig00000980.5 no hits & (original description: no original description) 0.8981585266840015 61 evm.model.tig00021680.33 no hits & (original description: no original description) 0.8954687196843252 53 evm.model.tig00000663.58 no hits & (original description: no original description) 0.8945190796220567 97 evm.model.tig00000269.67 no hits & (original description: no original description) 0.8922214473966676 32 evm.model.tig00000073.10 no hits & (original description: no original description) 0.8917345683168971 83 evm.model.tig00020614.75 (at2g42680 : 125.0) One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is developmentally regulated.; multiprotein bridging factor 1A (MBF1A); CONTAINS InterPro DOMAIN/s: Lambda repressor-like, DNA-binding (InterPro:IPR010982), Multiprotein bridging factor 1, N-terminal (InterPro:IPR013729), Helix-turn-helix type 3 (InterPro:IPR001387); BEST Arabidopsis thaliana protein match is: multiprotein bridging factor 1B (TAIR:AT3G58680.1); Has 672 Blast hits to 672 proteins in 252 species: Archae - 42; Bacteria - 8; Metazoa - 193; Fungi - 147; Plants - 135; Viruses - 2; Other Eukaryotes - 145 (source: NCBI BLink). & (reliability: 250.0) & (original description: no original description) 0.890611227462338 56 evm.model.tig00001029.14 no hits & (original description: no original description) 0.8903689945769789 68 evm.model.tig00020554.14 no hits & (original description: no original description) 0.8895061031614171 61 evm.model.tig00000204.25 no hits & (original description: no original description) 0.8886189459937608 90 evm.model.tig00000545.9 no hits & (original description: no original description) 0.8881465114160799 60 evm.model.tig00000269.28 no hits & (original description: no original description) 0.8872202683962106 39 evm.model.tig00021721.5 (at2g21270 : 168.0) ubiquitin fusion degradation 1 (UFD1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin fusion degradation protein UFD1 (InterPro:IPR004854); BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT4G38930.2); Has 705 Blast hits to 703 proteins in 222 species: Archae - 8; Bacteria - 2; Metazoa - 165; Fungi - 211; Plants - 127; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (reliability: 336.0) & (original description: no original description) 0.8863149553041627 40 evm.model.tig00000391.5 no hits & (original description: no original description) 0.8847591842875577 42 evm.model.tig00000692.65 (q6f332|calm2_orysa : 213.0) Calmodulin-2 (CaM-2) - Oryza sativa (Rice) & (at5g37780 : 211.0) encodes a calmodulin that is involved in thigmomorphogenesis. Gene expression is rapidly induced upon a variety of abiotic stimuli, including water spray, subirrigation, wind, touch, wounding, or darkness.; calmodulin 1 (CAM1); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 4 (TAIR:AT1G66410.1); Has 29914 Blast hits to 22079 proteins in 1723 species: Archae - 3; Bacteria - 127; Metazoa - 13080; Fungi - 6590; Plants - 6083; Viruses - 0; Other Eukaryotes - 4031 (source: NCBI BLink). & (reliability: 422.0) & (original description: no original description) 0.8830874886268987 85 evm.model.tig00021127.150 no hits & (original description: no original description) 0.8828602878782232 45 evm.model.tig00000478.16 no hits & (original description: no original description) 0.8813373527754774 77 evm.model.tig00021464.27 no hits & (original description: no original description) 0.8804263259231937 73 evm.model.tig00000792.7 (at5g20570 : 196.0) Encodes a ring-box 1 like protein and component of the SCF ubiquitinization complex mediating auxin responses. Forms a E3 ubiquitin ligase complex with CUL3A and At1g21780.1 a BTB domain protein.; RING-box 1 (RBX1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G42830.1); Has 1088 Blast hits to 1088 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 498; Fungi - 214; Plants - 176; Viruses - 3; Other Eukaryotes - 197 (source: NCBI BLink). & (reliability: 392.0) & (original description: no original description) 0.8802548919979535 77 evm.model.tig00021612.47 no hits & (original description: no original description) 0.8789472278943719 62 evm.model.tig00000802.46 no hits & (original description: no original description) 0.877453331742355 54 evm.model.tig00020828.10 no hits & (original description: no original description) 0.876898475339394 72 evm.model.tig00000704.54 "(at4g14540 : 106.0) ""nuclear factor Y, subunit B3"" (NF-YB3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B2 (TAIR:AT5G47640.1); Has 1532 Blast hits to 1532 proteins in 250 species: Archae - 0; Bacteria - 1; Metazoa - 503; Fungi - 375; Plants - 529; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (p25209|nfyb_maize : 105.0) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) & (reliability: 212.0) & (original description: no original description)" 0.8767354944817126 64 evm.model.tig00001339.5 (at3g60820 : 231.0) Encodes 20S proteasome beta subunit PBF1 (PBF1).; PBF1; FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: defense response to fungus, incompatible interaction, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: proteasome beta subunit C1 (TAIR:AT1G21720.1). & (o64464|psb1_orysa : 231.0) Proteasome subunit beta type 1 (EC 3.4.25.1) (20S proteasome alpha subunit F) (20S proteasome subunit beta-6) - Oryza sativa (Rice) & (reliability: 462.0) & (original description: no original description) 0.8759032422363999 67 evm.model.tig00020904.76 no hits & (original description: no original description) 0.8758993189866231 58 evm.model.tig00000361.21 no hits & (original description: no original description) 0.8758032231666321 59 evm.model.tig00000553.39 (at5g48870 : 122.0) SAD1 encodes a polypeptide similar to multifunctional Sm-like snRNP proteins that are required for mRNA splicing, export, and degradation. Mutation in this gene increases plant sensitivity to drought stress and ABA in seed germination, root growth, and the expression of some stress-responsive genes.; SUPERSENSITIVE TO ABA AND DROUGHT 1 (SAD1); CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 244.0) & (original description: no original description) 0.8756448155773217 60 evm.model.tig00000342.28 no hits & (original description: no original description) 0.8745047155816847 90 evm.model.tig00000310.83 no hits & (original description: no original description) 0.8728999382327043 73 evm.model.tig00020564.33 no hits & (original description: no original description) 0.8723557043249793 71 evm.model.tig00020902.47 no hits & (original description: no original description) 0.8713998954439359 70 evm.model.tig00000241.39 (at5g10980 : 132.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT4G40030.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q71h73|h33_vitvi : 132.0) Histone H3.3 - Vitis vinifera (Grape) & (reliability: 264.0) & (original description: no original description) 0.8713692378812412 71 evm.model.tig00000241.37 (at5g09920 : 94.0) Non-catalytic subunit specific to DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB4); NRPB4; CONTAINS InterPro DOMAIN/s: HRDC-like (InterPro:IPR010997), RNA polymerase II, Rpb4 (InterPro:IPR005574), RNA polymerase II, Rpb4, core (InterPro:IPR006590); BEST Arabidopsis thaliana protein match is: RNA polymerase II, Rpb4, core protein (TAIR:AT4G15950.1); Has 441 Blast hits to 441 proteins in 181 species: Archae - 4; Bacteria - 0; Metazoa - 144; Fungi - 150; Plants - 95; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 188.0) & (original description: no original description) 0.8703832509395841 88 evm.model.tig00000057.73 no hits & (original description: no original description) 0.8697794502979168 75 evm.model.tig00000737.30 no hits & (original description: no original description) 0.8690280295586722 76 evm.model.tig00000254.76 no hits & (original description: no original description) 0.8688419646642717 77 evm.model.tig00021179.72 no hits & (original description: no original description) 0.8672099061768417 80 evm.model.tig00000826.22 (q9lst7|psb3_orysa : 263.0) Proteasome subunit beta type 3 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit beta-3) - Oryza sativa (Rice) & (at1g21720 : 259.0) 20S proteasome beta subunit PBC1 truncated protein (PBC1); proteasome beta subunit C1 (PBC1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit C2 (TAIR:AT1G77440.2); Has 3309 Blast hits to 3309 proteins in 436 species: Archae - 498; Bacteria - 34; Metazoa - 1257; Fungi - 828; Plants - 282; Viruses - 0; Other Eukaryotes - 410 (source: NCBI BLink). & (reliability: 518.0) & (original description: no original description) 0.8666510622191061 82 evm.model.tig00000970.33 no hits & (original description: no original description) 0.8650356756351874 84 evm.model.tig00021726.1 no hits & (original description: no original description) 0.8647437314276843 85 evm.model.tig00001299.14 no hits & (original description: no original description) 0.8639089905756581 88 evm.model.tig00000388.34 no hits & (original description: no original description) 0.8608780339761389 91 evm.model.tig00021137.23 no hits & (original description: no original description) 0.8587750285202689 93 evm.model.tig00021319.41 no hits & (original description: no original description) 0.8567127008998829 100