Sequence Description Alias PCC hrr evm.model.tig00000203.26 no hits & (original description: no original description) 0.9340163522314398 1 evm.model.tig00020537.33 no hits & (original description: no original description) 0.9299335406102887 13 evm.model.tig00021319.13 no hits & (original description: no original description) 0.9298594938870653 11 evm.model.tig00020614.121 no hits & (original description: no original description) 0.9280938130056987 4 evm.model.tig00020675.81 (at3g55850 : 83.2) Encodes a product that might regulate nucleo-cytoplasmic trafficking of an intermediate(s) involved in phyA signal transduction. Differs from isoform 2 only in the first few N-terminal amino acids.; LONG AFTER FAR-RED 3 (LAF3); FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds; INVOLVED IN: biological_process unknown; LOCATED IN: perinuclear region of cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidohydrolase 3 (InterPro:IPR013108), Metal-dependent hydrolase, composite domain (InterPro:IPR011059); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 166.4) & (original description: no original description) 0.9274836742032996 30 evm.model.tig00000444.4 no hits & (original description: no original description) 0.9246099254395349 6 evm.model.tig00000760.21 no hits & (original description: no original description) 0.9180278486795703 32 evm.model.tig00020563.183 no hits & (original description: no original description) 0.9160491046064698 12 evm.model.tig00000310.64 no hits & (original description: no original description) 0.9152827047915072 30 evm.model.tig00021127.15 (at2g39020 : 83.2) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G39030.1); Has 2080 Blast hits to 2079 proteins in 734 species: Archae - 26; Bacteria - 1286; Metazoa - 282; Fungi - 96; Plants - 61; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). & (reliability: 166.4) & (original description: no original description) 0.9149581504795921 11 evm.model.tig00000949.11 (at5g53920 : 91.3) ribosomal protein L11 methyltransferase-related; FUNCTIONS IN: protein methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11 methyltransferase (InterPro:IPR004498), Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 182.6) & (original description: no original description) 0.9143710827159794 44 evm.model.tig00000241.99 no hits & (original description: no original description) 0.9140132232874385 98 evm.model.tig00021521.22 no hits & (original description: no original description) 0.9134587697290503 58 evm.model.tig00001493.4 (at1g75660 : 95.1) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (reliability: 190.2) & (original description: no original description) 0.9117621085612289 27 evm.model.tig00000692.75 (at5g25800 : 114.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: small RNA degrading nuclease 1 (TAIR:AT3G50100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 228.0) & (original description: no original description) 0.9106068024576843 28 evm.model.tig00020610.105 no hits & (original description: no original description) 0.9101140649857219 93 evm.model.tig00021504.10 no hits & (original description: no original description) 0.9085606732799624 32 evm.model.tig00000093.231 no hits & (original description: no original description) 0.9078051180242427 48 evm.model.tig00021435.6 no hits & (original description: no original description) 0.9070399237914155 53 evm.model.tig00000842.24 no hits & (original description: no original description) 0.9069231984045409 79 evm.model.tig00000655.65 (at5g05130 : 110.0) DNA/RNA helicase protein; FUNCTIONS IN: in 6 functions; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 220.0) & (original description: no original description) 0.9063028485323757 65 evm.model.tig00000984.6 no hits & (original description: no original description) 0.9058770833653856 35 evm.model.tig00021537.7 no hits & (original description: no original description) 0.9052483510522115 97 evm.model.tig00020572.51 no hits & (original description: no original description) 0.9041837437531357 27 evm.model.tig00000385.25 no hits & (original description: no original description) 0.9018492370389771 99 evm.model.tig00001098.17 no hits & (original description: no original description) 0.901663082418604 37 evm.model.tig00000955.31 no hits & (original description: no original description) 0.901070746986287 65 evm.model.tig00000237.2 no hits & (original description: no original description) 0.9009023735403497 52 evm.model.tig00000865.59 (at3g20540 : 295.0) polymerase gamma 1 (POLGAMMA1); FUNCTIONS IN: 3'-5' exonuclease activity, DNA-directed DNA polymerase activity, DNA binding, nucleic acid binding; INVOLVED IN: DNA replication, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: male gametophyte; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA polymerase A domain (InterPro:IPR002298), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: polymerase gamma 2 (TAIR:AT1G50840.1). & (reliability: 590.0) & (original description: no original description) 0.900438440453501 97 evm.model.tig00000880.15 no hits & (original description: no original description) 0.9003905828897246 67 evm.model.tig00020723.16 no hits & (original description: no original description) 0.8997873587710384 37 evm.model.tig00001086.16 no hits & (original description: no original description) 0.89853005317668 65 evm.model.tig00000889.11 no hits & (original description: no original description) 0.8977890601893147 67 evm.model.tig00000383.57 (at5g10630 : 146.0) Translation elongation factor EF1A/initiation factor IF2gamma family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Zinc finger, RanBP2-type (InterPro:IPR001876), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT1G18070.2). & (q41803|ef1a_maize : 140.0) Elongation factor 1-alpha (EF-1-alpha) - Zea mays (Maize) & (reliability: 292.0) & (original description: no original description) 0.8975394506197633 47 evm.model.tig00000025.58 no hits & (original description: no original description) 0.8971507918843104 89 evm.model.tig00020553.208 no hits & (original description: no original description) 0.8960858699911111 49 evm.model.tig00000093.12 no hits & (original description: no original description) 0.896026685912482 46 evm.model.tig00000073.37 no hits & (original description: no original description) 0.8951495037638708 100 evm.model.tig00000190.59 (q41651|cypb_vicfa : 169.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) (CYP B) - Vicia faba (Broad bean) & (at5g13120 : 154.0) Encodes a lumenal cyclophilin with peptidyl-prolyl isomerase activity that is associated with the NAD(P)H dehydrogenase complex in stromal regions of the thylakoid membrane. It is likely to be important for the accumulation of the hydrophobic domain of the NAD(P)H dehydrogenase complex. This complex is associated with PSI and is responsible for the reduction of plastoquinone.; cyclophilin 20-2 (CYP20-2); CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: rotamase CYP 4 (TAIR:AT3G62030.1). & (reliability: 308.0) & (original description: no original description) 0.8950572641732291 49 evm.model.tig00000455.27 no hits & (original description: no original description) 0.8949341138592066 50 evm.model.tig00000144.101 no hits & (original description: no original description) 0.8945434970975356 87 evm.model.tig00021504.9 no hits & (original description: no original description) 0.8944547879091221 74 evm.model.tig00000123.17 no hits & (original description: no original description) 0.8895340586539937 92 evm.model.tig00021275.5 no hits & (original description: no original description) 0.8886260995100937 69 evm.model.tig00020849.39 no hits & (original description: no original description) 0.8874144009013483 75 evm.model.tig00000178.23 no hits & (original description: no original description) 0.8865893143052129 80 evm.model.tig00001388.14 no hits & (original description: no original description) 0.8864901595040261 81 evm.model.tig00001366.9 (at1g22940 : 111.0) Encodes a bifunctional enzyme required for thiamine (vitamin B1) biosynthesis. TH1 can phosphorylate HMP-P to produce HMP-PP, the pyrimidine heterocyclic subunit of thiamine. TH1 also catalyzes the condensation of HMP-PP and HET to form thiamine monophosphate (TMP). TH1 also appears capable of phosphorylating HMP based on E.coli mutant complementation assays. th1 mutants are thiamine auxotrophs that die as seedlings on unsupplemented media.; THIAMINE REQUIRING 1 (TH1); FUNCTIONS IN: phosphomethylpyrimidine kinase activity, thiamin-phosphate diphosphorylase activity, hydroxymethylpyrimidine kinase activity; INVOLVED IN: thiamin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine monophosphate synthase (InterPro:IPR003733), Phosphomethylpyrimidine kinase type-2 (InterPro:IPR004399), Aldolase-type TIM barrel (InterPro:IPR013785), Phosphomethylpyrimidine kinase type-1 (InterPro:IPR013749); Has 15989 Blast hits to 15891 proteins in 2548 species: Archae - 338; Bacteria - 12149; Metazoa - 165; Fungi - 331; Plants - 107; Viruses - 0; Other Eukaryotes - 2899 (source: NCBI BLink). & (reliability: 222.0) & (original description: no original description) 0.8837910080802552 88 evm.model.tig00021179.75 no hits & (original description: no original description) 0.8824057714722446 97 evm.model.tig00000403.86 no hits & (original description: no original description) 0.8822186485889538 100