Sequence Description Alias PCC hrr evm.model.tig00000692.75 (at5g25800 : 114.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: small RNA degrading nuclease 1 (TAIR:AT3G50100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 228.0) & (original description: no original description) 0.926595126865368 4 evm.model.tig00000241.99 no hits & (original description: no original description) 0.9244331445227012 55 evm.model.tig00000880.10 no hits & (original description: no original description) 0.9154032754388899 43 evm.model.tig00000792.46 no hits & (original description: no original description) 0.9068542329327721 12 evm.model.tig00000863.2 (at3g54280 : 205.0) ROOT GROWTH DEFECTIVE 3 (RGD3); FUNCTIONS IN: helicase activity, binding, DNA binding, nucleic acid binding, ATP binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), DEAD-like helicase, N-terminal (InterPro:IPR014001), Armadillo-type fold (InterPro:IPR016024), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1). & (q7g8y3|isw2_orysa : 181.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 410.0) & (original description: no original description) 0.902676105885117 66 evm.model.tig00001250.10 (at4g36850 : 87.0) PQ-loop repeat family protein / transmembrane family protein; CONTAINS InterPro DOMAIN/s: Cystinosin/ERS1p repeat (InterPro:IPR006603); BEST Arabidopsis thaliana protein match is: PQ-loop repeat family protein / transmembrane family protein (TAIR:AT2G41050.1); Has 883 Blast hits to 635 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 204; Fungi - 499; Plants - 92; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 174.0) & (original description: no original description) 0.9016190935238152 59 evm.model.tig00021035.28 (at3g08730 : 170.0) Encodes a protein-serine kinase that phosphorylates ribosomal protein in vitro. Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Involved in translational up-regulation of ribosomal proteins. Phosphorylated by PDK1. Interacts with RAPTOR1, which in turn interacts with TOR. SPK6 activity is affected by osmotic stress, and plants overexpressing S6k1 are hypersensitive to osmotic stress. The gene is expressed in all tissues examined, with highest expression level detected in metabolically active tissues.; protein-serine kinase 1 (PK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: serine/threonine protein kinase 2 (TAIR:AT3G08720.2); Has 134224 Blast hits to 132007 proteins in 4588 species: Archae - 200; Bacteria - 15979; Metazoa - 48799; Fungi - 13454; Plants - 32927; Viruses - 586; Other Eukaryotes - 22279 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 91.7) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 340.0) & (original description: no original description) 0.9009652043074151 47 evm.model.tig00020848.89 no hits & (original description: no original description) 0.8955797257565877 45 evm.model.tig00020723.107 no hits & (original description: no original description) 0.895549822895709 52 evm.model.tig00020675.71 no hits & (original description: no original description) 0.8948045610439331 53 evm.model.tig00021318.22 no hits & (original description: no original description) 0.8915693915844487 37 evm.model.tig00020539.44 no hits & (original description: no original description) 0.8914825536010713 32 evm.model.tig00020723.14 no hits & (original description: no original description) 0.8899852169385811 93 evm.model.tig00020961.109 no hits & (original description: no original description) 0.889130290498294 55 evm.model.tig00000889.11 no hits & (original description: no original description) 0.8882281822285302 97 evm.model.tig00020927.17 no hits & (original description: no original description) 0.884863050494841 31 evm.model.tig00001335.1 no hits & (original description: no original description) 0.8836776129588868 83 evm.model.tig00020554.82 no hits & (original description: no original description) 0.8823095696731366 56 evm.model.tig00000042.58 no hits & (original description: no original description) 0.875397180833598 84 evm.model.tig00021728.9 no hits & (original description: no original description) 0.8742963825098464 41 evm.model.tig00021532.12 no hits & (original description: no original description) 0.8740750198348132 42 evm.model.tig00001027.29 (at4g15850 : 89.4) plant DEAD box-like RNA helicase.; RNA helicase 1 (RH1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT4G16630.1); Has 38711 Blast hits to 38056 proteins in 2969 species: Archae - 603; Bacteria - 19125; Metazoa - 5736; Fungi - 4393; Plants - 2535; Viruses - 13; Other Eukaryotes - 6306 (source: NCBI BLink). & (reliability: 178.8) & (original description: no original description) 0.8733551281075946 78 evm.model.tig00020556.92 no hits & (original description: no original description) 0.871726744216083 62 evm.model.tig00020693.23 no hits & (original description: no original description) 0.871667778278057 49 evm.model.tig00001376.27 no hits & (original description: no original description) 0.8708233046178327 52 evm.model.tig00020685.3 no hits & (original description: no original description) 0.8703123956098072 53 evm.model.tig00001154.11 (at4g30000 : 114.0) Dihydropterin pyrophosphokinase / Dihydropteroate synthase; FUNCTIONS IN: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity, dihydropteroate synthase activity; INVOLVED IN: pteridine and derivative metabolic process, cellular metabolic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydropteroate synthase-like (InterPro:IPR011005), 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK (InterPro:IPR000550), Dihydropteroate synthase (InterPro:IPR006390), Pterin-binding (InterPro:IPR000489); BEST Arabidopsis thaliana protein match is: Dihydropterin pyrophosphokinase / Dihydropteroate synthase (TAIR:AT1G69190.1). & (reliability: 228.0) & (original description: no original description) 0.8655205735466677 75 evm.model.tig00020553.192 no hits & (original description: no original description) 0.8648681424512794 64 evm.model.tig00001086.29 no hits & (original description: no original description) 0.8648480218864809 65 evm.model.tig00000903.1 no hits & (original description: no original description) 0.863939427088418 70 evm.model.tig00001065.24 (at5g40200 : 343.0) Encodes a putative DegP protease.; DegP protease 9 (DegP9); FUNCTIONS IN: serine-type peptidase activity, catalytic activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Serine endopeptidase DegP2 (InterPro:IPR015724), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DEGP protease 2 (TAIR:AT2G47940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 686.0) & (original description: no original description) 0.8637642089662355 73 evm.model.tig00000630.16 no hits & (original description: no original description) 0.8634709934783087 75 evm.model.tig00000093.222 no hits & (original description: no original description) 0.8632052546318911 76 evm.model.tig00000403.85 (at3g62260 : 80.5) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G48040.1); Has 7565 Blast hits to 7530 proteins in 876 species: Archae - 12; Bacteria - 1215; Metazoa - 1621; Fungi - 781; Plants - 2594; Viruses - 9; Other Eukaryotes - 1333 (source: NCBI BLink). & (reliability: 161.0) & (original description: no original description) 0.8623451000370644 84 evm.model.tig00001065.14 (at2g29200 : 403.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 1 (PUM1); FUNCTIONS IN: RNA binding, binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nucleic acid binding NABP (InterPro:IPR012940), Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 3 (TAIR:AT2G29140.1); Has 3905 Blast hits to 1986 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 808; Fungi - 1312; Plants - 896; Viruses - 0; Other Eukaryotes - 889 (source: NCBI BLink). & (reliability: 806.0) & (original description: no original description) 0.8613686650387856 88 evm.model.tig00000488.2 no hits & (original description: no original description) 0.8556817970882946 100