Sequence Description Alias PCC hrr evm.model.tig00001636.6 no hits & (original description: no original description) 0.9215234777947677 4 evm.model.tig00000889.1 (at2g24820 : 139.0) translocon at the inner envelope membrane of chloroplasts 55-II (TIC55-II); FUNCTIONS IN: oxidoreductase activity, 2 iron, 2 sulfur cluster binding, chlorophyllide a oxygenase [overall] activity; INVOLVED IN: protein targeting to chloroplast; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Pheophorbide a oxygenase (InterPro:IPR013626); BEST Arabidopsis thaliana protein match is: Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain (TAIR:AT3G44880.1); Has 5409 Blast hits to 5405 proteins in 897 species: Archae - 6; Bacteria - 3841; Metazoa - 59; Fungi - 58; Plants - 409; Viruses - 0; Other Eukaryotes - 1036 (source: NCBI BLink). & (q9zwm5|cao_chlre : 103.0) Chlorophyllide a oxygenase, chloroplast precursor (EC 1.13.12.14) (Chlorophyll a oxygenase) (Chlorophyll b synthase) - Chlamydomonas reinhardtii & (reliability: 278.0) & (original description: no original description) 0.9056912030226045 6 evm.model.tig00021537.29 no hits & (original description: no original description) 0.9012473666628388 3 evm.model.tig00021680.23 no hits & (original description: no original description) 0.9009478355834403 15 evm.model.tig00021493.18 no hits & (original description: no original description) 0.8966835664139181 5 evm.model.tig00001001.9 no hits & (original description: no original description) 0.8787977427030158 26 evm.model.tig00000114.29 no hits & (original description: no original description) 0.8779595540190681 9 evm.model.tig00021623.18 no hits & (original description: no original description) 0.8664725971727686 40 evm.model.tig00020904.102 no hits & (original description: no original description) 0.8633105702602719 30 evm.model.tig00021127.148 no hits & (original description: no original description) 0.8632760321779779 31 evm.model.tig00000733.11 no hits & (original description: no original description) 0.8617654590397269 38 evm.model.tig00020703.41 no hits & (original description: no original description) 0.8598703413376733 29 evm.model.tig00000640.21 no hits & (original description: no original description) 0.8577188894492698 20 evm.model.tig00000383.60 (at1g10760 : 187.0) Encodes an α-glucan, water dikinase required for starch degradation. Involved in cold-induced freezing tolerance. Mutations that eliminate the GWD protein or affect the dikinase domain of the enzyme dramatically reduce both the amount of phosphate in the amylopectin and the rate of starch degradation. Mature leaves of these mutants accumulate amounts of starch up to seven times greater than those in wild-type leaves. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C6 position.; STARCH EXCESS 1 (SEX1); FUNCTIONS IN: protein binding, alpha-glucan, water dikinase activity; INVOLVED IN: cold acclimation, response to symbiotic fungus, response to trehalose stimulus, circadian rhythm, starch catabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate phosphate dikinase, PEP/pyruvate-binding (InterPro:IPR002192); BEST Arabidopsis thaliana protein match is: phosphoglucan, water dikinase (TAIR:AT4G24450.1); Has 2623 Blast hits to 2596 proteins in 1116 species: Archae - 196; Bacteria - 1989; Metazoa - 24; Fungi - 8; Plants - 221; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (q9awa5|gwd1_soltu : 177.0) Alpha-glucan water dikinase, chloroplast precursor (EC 2.7.9.4) (EC 2.7.13.3) (Starch-related R1 protein) - Solanum tuberosum (Potato) & (reliability: 374.0) & (original description: no original description) 0.8565458089868485 14 evm.model.tig00001065.35 (at1g50430 : 228.0) Mutants are defective in Brassinosteroid biosynthesis (delta7-sterol-C7 reduction step) and have a dwarf phenotype.; DWARF 5 (DWF5); FUNCTIONS IN: sterol delta7 reductase activity; INVOLVED IN: sterol biosynthetic process, unidimensional cell growth, brassinosteroid biosynthetic process; LOCATED IN: integral to endoplasmic reticulum membrane, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sterol reductase, conserved site (InterPro:IPR018083), Ergosterol biosynthesis ERG4/ERG24 (InterPro:IPR001171); BEST Arabidopsis thaliana protein match is: Ergosterol biosynthesis ERG4/ERG24 family (TAIR:AT3G52940.1); Has 974 Blast hits to 971 proteins in 205 species: Archae - 0; Bacteria - 51; Metazoa - 266; Fungi - 402; Plants - 150; Viruses - 3; Other Eukaryotes - 102 (source: NCBI BLink). & (reliability: 456.0) & (original description: no original description) 0.8541818276077354 15 evm.model.tig00000282.13 no hits & (original description: no original description) 0.8513587728138938 82 evm.model.tig00000114.28 no hits & (original description: no original description) 0.8501778672689708 17 evm.model.tig00020703.42 no hits & (original description: no original description) 0.8480691088133515 36 evm.model.tig00021357.23 no hits & (original description: no original description) 0.8480539960899508 28 evm.model.tig00000870.32 (at2g47390 : 551.0) Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106); BEST Arabidopsis thaliana protein match is: acylaminoacyl-peptidase-related (TAIR:AT4G14570.1); Has 4880 Blast hits to 4877 proteins in 846 species: Archae - 179; Bacteria - 3027; Metazoa - 477; Fungi - 49; Plants - 145; Viruses - 0; Other Eukaryotes - 1003 (source: NCBI BLink). & (reliability: 1102.0) & (original description: no original description) 0.8469785432674061 20 evm.model.tig00021318.69 no hits & (original description: no original description) 0.8463789452237807 41 evm.model.tig00001071.8 no hits & (original description: no original description) 0.8444016981752617 31 evm.model.tig00021244.18 no hits & (original description: no original description) 0.8436984397415056 35 evm.model.tig00020909.13 no hits & (original description: no original description) 0.8408351035987784 30 evm.model.tig00020563.171 (at3g27110 : 254.0) Peptidase family M48 family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M48 (InterPro:IPR001915); Has 2654 Blast hits to 2654 proteins in 909 species: Archae - 247; Bacteria - 2042; Metazoa - 0; Fungi - 12; Plants - 34; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink). & (reliability: 508.0) & (original description: no original description) 0.8393968623967717 26 evm.model.tig00000219.34 no hits & (original description: no original description) 0.8373668819785761 27 evm.model.tig00000342.19 no hits & (original description: no original description) 0.8372930854235722 40 evm.model.tig00021123.17 (at5g15930 : 167.0) Encodes a putative plant adhesion molecule.; plant adhesion molecule 1 (PAM1); FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT3G02460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 330.0) & (original description: no original description) 0.8366963553019731 29 evm.model.tig00001669.8 no hits & (original description: no original description) 0.8365212156261694 30 evm.model.tig00020675.34 no hits & (original description: no original description) 0.8360370595400053 31 evm.model.tig00020660.37 (at1g21410 : 88.6) AtSKP2;1 is a homolog of human SKP2, the human F-box protein that recruits E2F1. Contains an F-box motif at the N-terminal region and a C-terminal Leu-rich repeat domain. Forms part of an E3-ubiquitin-ligase SCF (Skp1, cullin, F-box) complex and recruits phosphorylated AtE2Fc, a transcriptional factor that might play a role in cell division and during the transition from skotomorphogenesis to photomorphogenesis. AtSKP2;1 (At1g21410) and AtSKP2;2 (At1g77000) may be duplicated genes.; SKP2A; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT1G77000.2); Has 8874 Blast hits to 3879 proteins in 263 species: Archae - 0; Bacteria - 386; Metazoa - 3510; Fungi - 1080; Plants - 2969; Viruses - 9; Other Eukaryotes - 920 (source: NCBI BLink). & (reliability: 177.2) & (original description: no original description) 0.834922939037299 32 evm.model.tig00021105.31 (at1g54520 : 82.4) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1517 (InterPro:IPR010903); Has 276 Blast hits to 275 proteins in 83 species: Archae - 0; Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 164.8) & (original description: no original description) 0.8347114244958254 57 evm.model.tig00021494.27 no hits & (original description: no original description) 0.8326249492968004 34 evm.model.tig00021537.49 no hits & (original description: no original description) 0.8324054561656742 35 evm.model.tig00020571.11 (at4g10790 : 135.0) UBX domain-containing protein; CONTAINS InterPro DOMAIN/s: UAS (InterPro:IPR006577), UBX (InterPro:IPR001012); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G23040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 270.0) & (original description: no original description) 0.8290557638979208 36 evm.model.tig00000444.29 no hits & (original description: no original description) 0.8273696944225061 40 evm.model.tig00000093.145 no hits & (original description: no original description) 0.82604188206874 57 evm.model.tig00021015.12 no hits & (original description: no original description) 0.8256936392494137 53 evm.model.tig00021108.84 no hits & (original description: no original description) 0.8252476922864984 48 evm.model.tig00020904.103 no hits & (original description: no original description) 0.8245951866448099 41 evm.model.tig00000939.10 no hits & (original description: no original description) 0.8230425744361347 42 evm.model.tig00021491.5 no hits & (original description: no original description) 0.822952474407923 43 evm.model.tig00000540.18 no hits & (original description: no original description) 0.8207951510226985 46 evm.model.tig00021314.21 no hits & (original description: no original description) 0.8196305281811193 48 evm.model.tig00021745.25 no hits & (original description: no original description) 0.8192073937711397 56 evm.model.tig00021351.9 no hits & (original description: no original description) 0.8168004587716757 60 evm.model.tig00021339.24 no hits & (original description: no original description) 0.8166128322952677 52 evm.model.tig00000147.21 no hits & (original description: no original description) 0.8145777306322334 53 evm.model.tig00000640.2 no hits & (original description: no original description) 0.811711513133974 69 evm.model.tig00000293.29 no hits & (original description: no original description) 0.8094551974583173 57 evm.model.tig00000711.69 (at5g43530 : 188.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: in 6 functions; LOCATED IN: chloroplast envelope; EXPRESSED IN: shoot apex, embryo, male gametophyte, flower, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 360.0) & (original description: no original description) 0.8070307956669375 64 evm.model.tig00020703.43 no hits & (original description: no original description) 0.8069219738442395 70 evm.model.tig00020951.45 no hits & (original description: no original description) 0.8067670912855673 70 evm.model.tig00020704.57 no hits & (original description: no original description) 0.8039266534800132 59 evm.model.tig00000970.22 no hits & (original description: no original description) 0.8024436126167245 63 evm.model.tig00000093.195 no hits & (original description: no original description) 0.8019233375919627 65 evm.model.tig00000219.35 no hits & (original description: no original description) 0.8014276641326711 66 evm.model.tig00021123.14 (at5g35980 : 248.0) yeast YAK1-related gene 1 (YAK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G17750.1); Has 91682 Blast hits to 90157 proteins in 2771 species: Archae - 99; Bacteria - 7981; Metazoa - 36897; Fungi - 11192; Plants - 18283; Viruses - 359; Other Eukaryotes - 16871 (source: NCBI BLink). & (q40532|ntf4_tobac : 116.0) Mitogen-activated protein kinase homolog NTF4 (EC 2.7.11.24) (P45) - Nicotiana tabacum (Common tobacco) & (reliability: 496.0) & (original description: no original description) 0.8011105700056419 67 evm.model.tig00000144.189 no hits & (original description: no original description) 0.7978210528421379 69 evm.model.tig00021072.42 no hits & (original description: no original description) 0.7969214114491893 89 evm.model.tig00000147.39 no hits & (original description: no original description) 0.7969116702642269 72 evm.model.tig00021293.14 (at2g30160 : 124.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: transporter activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT1G07030.1); Has 27492 Blast hits to 13803 proteins in 455 species: Archae - 0; Bacteria - 0; Metazoa - 11880; Fungi - 7531; Plants - 5269; Viruses - 0; Other Eukaryotes - 2812 (source: NCBI BLink). & (reliability: 248.0) & (original description: no original description) 0.7959231489018598 73 evm.model.tig00000246.2 no hits & (original description: no original description) 0.7950407999016513 74 evm.model.tig00000237.10 no hits & (original description: no original description) 0.794913633428602 76 evm.model.tig00000093.107 no hits & (original description: no original description) 0.7929119487806908 77 evm.model.tig00000202.6 (at1g66340 : 158.0) Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.; ETHYLENE RESPONSE 1 (ETR1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: ethylene response sensor 1 (TAIR:AT2G40940.1); Has 102721 Blast hits to 98263 proteins in 3046 species: Archae - 757; Bacteria - 90102; Metazoa - 18; Fungi - 1611; Plants - 2314; Viruses - 21; Other Eukaryotes - 7898 (source: NCBI BLink). & (o49230|etr1_braol : 157.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 316.0) & (original description: no original description) 0.7924454069503724 78 evm.model.tig00020830.26 no hits & (original description: no original description) 0.7919887037452867 79 evm.model.tig00021435.17 no hits & (original description: no original description) 0.7918056446516424 80 evm.model.tig00000203.34 no hits & (original description: no original description) 0.7909317194088111 82 evm.model.tig00020903.7 no hits & (original description: no original description) 0.790614549114266 83 evm.model.tig00000912.32 no hits & (original description: no original description) 0.7898425169372049 85 evm.model.tig00020563.189 no hits & (original description: no original description) 0.7874301931511972 87 evm.model.tig00001224.26 no hits & (original description: no original description) 0.7869147028137412 88 evm.model.tig00020603.71 no hits & (original description: no original description) 0.7852815081271143 89 evm.model.tig00021366.19 no hits & (original description: no original description) 0.7841364548075791 93 evm.model.tig00020572.34 no hits & (original description: no original description) 0.7831435340041819 94 evm.model.tig00000841.9 (at4g36760 : 421.0) Arabidopsis aminopeptidase P1; aminopeptidase P1 (APP1); FUNCTIONS IN: aminopeptidase activity, N-1-naphthylphthalamic acid binding; INVOLVED IN: auxin polar transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site (InterPro:IPR001131), Peptidase M24, structural domain (InterPro:IPR000994), Creatinase (InterPro:IPR000587); BEST Arabidopsis thaliana protein match is: Metallopeptidase M24 family protein (TAIR:AT3G05350.1); Has 10398 Blast hits to 10335 proteins in 2401 species: Archae - 277; Bacteria - 6310; Metazoa - 362; Fungi - 246; Plants - 146; Viruses - 0; Other Eukaryotes - 3057 (source: NCBI BLink). & (reliability: 842.0) & (original description: no original description) 0.7827828244363396 95 evm.model.tig00021281.36 (at2g14255 : 101.0) Ankyrin repeat family protein with DHHC zinc finger domain; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT5G20350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 86.7) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 202.0) & (original description: no original description) 0.7825595957065649 96 evm.model.tig00001071.7 no hits & (original description: no original description) 0.7824089905922481 97 evm.model.tig00021168.14 no hits & (original description: no original description) 0.7815951562261881 98 evm.model.tig00020951.24 no hits & (original description: no original description) 0.7811429732758713 99