Sequence Description Alias PCC hrr evm.model.tig00000498.75 (at2g01900 : 105.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: hypocotyl, sepal, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT2G37440.1); Has 2320 Blast hits to 2027 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 735; Fungi - 544; Plants - 769; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink). & (reliability: 210.0) & (original description: no original description) 0.9391669320627274 1 evm.model.tig00001254.9 no hits & (original description: no original description) 0.9192755737133649 8 evm.model.tig00020675.19 no hits & (original description: no original description) 0.9189765174242125 5 evm.model.tig00021489.13 no hits & (original description: no original description) 0.9133782756285068 4 evm.model.tig00020510.131 (p93528|phyc_sorbi : 202.0) Phytochrome C - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (at5g35840 : 198.0) Encodes the apoprotein of phytochrome;one of a family of photoreceptors that modulate plant growth and development.; phytochrome C (PHYC); FUNCTIONS IN: protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Phytochrome, central region (InterPro:IPR013515), Signal transduction histidine kinase, core (InterPro:IPR005467), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Phytochrome chromophore attachment domain (InterPro:IPR016132), ATPase-like, ATP-binding domain (InterPro:IPR003594), PAS fold-2 (InterPro:IPR013654), Phytochrome A/B/C/D/E (InterPro:IPR012129), Phytochrome (InterPro:IPR001294), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Phytochrome chromophore binding site (InterPro:IPR013516), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: phytochrome A (TAIR:AT1G09570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 396.0) & (original description: no original description) 0.9089297239847524 30 evm.model.tig00000093.130 no hits & (original description: no original description) 0.9082779005143103 6 evm.model.tig00001234.17 (at2g31865 : 171.0) poly(ADP-ribose) glycohydrolase 2 (PARG2); FUNCTIONS IN: poly(ADP-ribose) glycohydrolase activity; INVOLVED IN: defense response to fungus; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) glycohydrolase (InterPro:IPR007724); BEST Arabidopsis thaliana protein match is: Poly (ADP-ribose) glycohydrolase (PARG) (TAIR:AT2G31870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 342.0) & (original description: no original description) 0.9068670341849193 14 evm.model.tig00000241.131 no hits & (original description: no original description) 0.9055028468849541 9 evm.model.tig00020903.31 no hits & (original description: no original description) 0.9036616811898496 64 evm.model.tig00001030.19 (at3g04240 : 99.0) Has O-linked N-acetyl glucosamine transferase activity. Similar to Arabidopsis SPY gene.; secret agent (SEC); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 114710 Blast hits to 35863 proteins in 2480 species: Archae - 3197; Bacteria - 54774; Metazoa - 16661; Fungi - 4580; Plants - 3873; Viruses - 0; Other Eukaryotes - 31625 (source: NCBI BLink). & (reliability: 198.0) & (original description: no original description) 0.9036580818751266 54 evm.model.tig00021135.10 no hits & (original description: no original description) 0.9009662473735406 26 evm.model.tig00021795.14 (at1g27320 : 136.0) Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.; histidine kinase 3 (HK3); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 124308 Blast hits to 110912 proteins in 3043 species: Archae - 772; Bacteria - 110408; Metazoa - 31; Fungi - 2185; Plants - 2022; Viruses - 28; Other Eukaryotes - 8862 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 127.0) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 272.0) & (original description: no original description) 0.8996987831322272 91 evm.model.tig00001086.11 no hits & (original description: no original description) 0.8990509686481792 14 evm.model.tig00001229.4 (at5g09860 : 97.1) Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; THO1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: production of ta-siRNAs involved in RNA interference, gene silencing by RNA; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: THO complex, subunit THOC1 (InterPro:IPR021861). & (reliability: 194.2) & (original description: no original description) 0.8970780873126583 28 evm.model.tig00021682.13 no hits & (original description: no original description) 0.8946238435107741 16 evm.model.tig00020704.6 (at5g10720 : 105.0) member of Histidine Kinase; histidine kinase 5 (HK5); FUNCTIONS IN: protein histidine kinase activity; INVOLVED IN: cytokinin mediated signaling pathway; LOCATED IN: vacuole; EXPRESSED IN: male gametophyte, root; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (TAIR:AT5G10680.1); Has 142896 Blast hits to 126384 proteins in 3154 species: Archae - 1152; Bacteria - 126386; Metazoa - 257; Fungi - 2334; Plants - 2049; Viruses - 33; Other Eukaryotes - 10685 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 95.9) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 210.0) & (original description: no original description) 0.893017187410294 35 evm.model.tig00001154.29 no hits & (original description: no original description) 0.8925113654426794 44 evm.model.tig00021517.24 no hits & (original description: no original description) 0.8923686303517218 78 evm.model.tig00021094.28 (at3g55270 : 164.0) MAP kinase phosphatase (MKP1); mitogen-activated protein kinase phosphatase 1 (MKP1); CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: MAPK phosphatase 2 (TAIR:AT3G06110.3); Has 4115 Blast hits to 4050 proteins in 297 species: Archae - 2; Bacteria - 48; Metazoa - 2335; Fungi - 439; Plants - 312; Viruses - 98; Other Eukaryotes - 881 (source: NCBI BLink). & (reliability: 328.0) & (original description: no original description) 0.8890003453355949 98 evm.model.tig00000147.58 (at1g13770 : 156.0) ROOT UV-B SENSITIVE 3 (RUS3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT3G45890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 312.0) & (original description: no original description) 0.888147898105948 23 evm.model.tig00021275.8 no hits & (original description: no original description) 0.8866717773098272 25 evm.model.tig00000769.51 no hits & (original description: no original description) 0.8841340226640122 24 evm.model.tig00021680.21 no hits & (original description: no original description) 0.8834306718991528 73 evm.model.tig00020849.35 no hits & (original description: no original description) 0.8826464490922563 55 evm.model.tig00020723.71 no hits & (original description: no original description) 0.8823351213945161 55 evm.model.tig00021276.7 no hits & (original description: no original description) 0.8818990526377973 31 evm.model.tig00000870.16 no hits & (original description: no original description) 0.8818565102540029 32 evm.model.tig00000025.3 no hits & (original description: no original description) 0.8816522686295831 70 evm.model.tig00020951.32 no hits & (original description: no original description) 0.8812863365903436 72 evm.model.tig00021682.12 no hits & (original description: no original description) 0.8801096982427283 37 evm.model.tig00000459.96 no hits & (original description: no original description) 0.8798010880508902 54 evm.model.tig00000076.46 no hits & (original description: no original description) 0.8797880468264742 90 evm.model.tig00020875.17 no hits & (original description: no original description) 0.8791500160302049 72 evm.model.tig00021179.55 no hits & (original description: no original description) 0.8787674573553377 57 evm.model.tig00000403.16 no hits & (original description: no original description) 0.8783754303028576 51 evm.model.tig00000178.8 no hits & (original description: no original description) 0.8781160485310531 44 evm.model.tig00000808.30 (at2g47410 : 137.0) WD40/YVTN repeat-like-containing domain;Bromodomain; FUNCTIONS IN: nucleotide binding; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Bromodomain (InterPro:IPR001487), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD40/YVTN repeat-like-containing domain;Bromodomain (TAIR:AT5G49430.1). & (reliability: 274.0) & (original description: no original description) 0.8771087671378108 45 evm.model.tig00000692.40 no hits & (original description: no original description) 0.8753359532214092 47 evm.model.tig00000789.28 no hits & (original description: no original description) 0.874480609258931 80 evm.model.tig00001284.18 no hits & (original description: no original description) 0.8742625144122051 50 evm.model.tig00021234.32 no hits & (original description: no original description) 0.8736046751250433 72 evm.model.tig00021463.4 (at5g44500 : 145.0) Small nuclear ribonucleoprotein family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleolus, nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Small ribonucleoprotein associated, SmB/SmN (InterPro:IPR017131), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: small nuclear ribonucleoprotein associated protein B (TAIR:AT4G20440.4); Has 60118 Blast hits to 30363 proteins in 1233 species: Archae - 62; Bacteria - 7735; Metazoa - 31237; Fungi - 6515; Plants - 7441; Viruses - 1395; Other Eukaryotes - 5733 (source: NCBI BLink). & (reliability: 290.0) & (original description: no original description) 0.8733071613046867 54 evm.model.tig00000079.3 no hits & (original description: no original description) 0.8728250338810266 55 evm.model.tig00020537.47 no hits & (original description: no original description) 0.8713562849598752 56 evm.model.tig00000411.23 no hits & (original description: no original description) 0.8713147967761481 96 evm.model.tig00000430.70 no hits & (original description: no original description) 0.870395332044848 59 evm.model.tig00000140.1 no hits & (original description: no original description) 0.8695118909730208 60 evm.model.tig00020943.51 no hits & (original description: no original description) 0.8690951728943559 88 evm.model.tig00000237.24 no hits & (original description: no original description) 0.8689522397631908 62 evm.model.tig00001339.12 no hits & (original description: no original description) 0.867278356038161 65 evm.model.tig00020553.178 no hits & (original description: no original description) 0.8639827020357307 93 evm.model.tig00000615.40 no hits & (original description: no original description) 0.8638126287684578 81 evm.model.tig00001366.16 (at3g26060 : 85.5) encodes periredoxin Q which decomposes peroxides and plays a role in the protection of the photosynthetic apparatus; ATPRX Q; FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, plastoglobule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: 2-cysteine peroxiredoxin B (TAIR:AT5G06290.1). & (reliability: 171.0) & (original description: no original description) 0.8630354661155328 81 evm.model.tig00001024.19 no hits & (original description: no original description) 0.861584855679055 77 evm.model.tig00000865.29 (at1g20960 : 190.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (reliability: 380.0) & (original description: no original description) 0.8610778588757076 80 evm.model.tig00021038.68 no hits & (original description: no original description) 0.8576337697673648 99 evm.model.tig00000711.50 no hits & (original description: no original description) 0.8572874600512318 88 evm.model.tig00000455.35 no hits & (original description: no original description) 0.8566227556837694 91 evm.model.tig00021168.10 no hits & (original description: no original description) 0.8564995967903544 92 evm.model.tig00020878.22 no hits & (original description: no original description) 0.8558700044504938 96 evm.model.tig00000754.9 no hits & (original description: no original description) 0.8552689792662678 97 evm.model.tig00000219.75 no hits & (original description: no original description) 0.8552246325711762 98 evm.model.tig00020563.197 no hits & (original description: no original description) 0.8541376516277975 100