Sequence Description Alias PCC hrr evm.model.tig00020592.56 (at2g26590 : 92.4) regulatory particle non-ATPase 13 (RPN13); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell adhesion; LOCATED IN: integral to membrane, nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 26S proteasome complex ubiquitin receptor, subunit Rpn13 (InterPro:IPR006773); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 184.8) & (original description: no original description) 0.9278351657792817 2 evm.model.tig00000114.31 no hits & (original description: no original description) 0.9184843508898765 14 evm.model.tig00001623.3 (at5g05560 : 98.2) Arabidopsis thaliana E3 ubiquitin ligase; EMBRYO DEFECTIVE 2771 (EMB2771); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 196.4) & (original description: no original description) 0.9169490699906703 28 evm.model.tig00020999.6 no hits & (original description: no original description) 0.9162018431062295 28 evm.model.tig00000459.20 no hits & (original description: no original description) 0.9151474558031328 16 evm.model.tig00000912.39 (at5g08710 : 85.9) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1); Has 22297 Blast hits to 6326 proteins in 481 species: Archae - 85; Bacteria - 2816; Metazoa - 7462; Fungi - 1554; Plants - 2765; Viruses - 0; Other Eukaryotes - 7615 (source: NCBI BLink). & (reliability: 171.8) & (original description: no original description) 0.913132083778117 15 evm.model.tig00021135.10 no hits & (original description: no original description) 0.911782796401947 17 evm.model.tig00020556.41 no hits & (original description: no original description) 0.9109880247565284 8 evm.model.tig00000430.70 no hits & (original description: no original description) 0.90848648695645 9 evm.model.tig00020848.46 no hits & (original description: no original description) 0.9066434452073537 83 evm.model.tig00000025.52 no hits & (original description: no original description) 0.9054530006629953 44 evm.model.tig00000367.43 no hits & (original description: no original description) 0.9053833021974481 40 evm.model.tig00000737.38 no hits & (original description: no original description) 0.9037905128164772 16 evm.model.tig00000923.9 no hits & (original description: no original description) 0.9011677503054544 14 evm.model.tig00020951.63 no hits & (original description: no original description) 0.9005469484505394 19 evm.model.tig00020614.96 no hits & (original description: no original description) 0.8996068751063182 45 evm.model.tig00020553.135 (at1g25290 : 89.0) RHOMBOID-like protein 10 (RBL10); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 5 (TAIR:AT1G52580.1). & (reliability: 178.0) & (original description: no original description) 0.8988242644078562 17 evm.model.tig00020934.32 no hits & (original description: no original description) 0.8963366402328274 31 evm.model.tig00021589.13 no hits & (original description: no original description) 0.8947396166071048 54 evm.model.tig00000350.24 no hits & (original description: no original description) 0.8942509850153697 20 evm.model.tig00020563.197 no hits & (original description: no original description) 0.8932106155120958 22 evm.model.tig00021319.64 no hits & (original description: no original description) 0.8931588698812193 96 evm.model.tig00000158.14 (at1g67820 : 123.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G30020.1); Has 6733 Blast hits to 6560 proteins in 362 species: Archae - 6; Bacteria - 120; Metazoa - 1758; Fungi - 815; Plants - 2713; Viruses - 9; Other Eukaryotes - 1312 (source: NCBI BLink). & (reliability: 246.0) & (original description: no original description) 0.8926391515782605 23 evm.model.tig00000178.53 no hits & (original description: no original description) 0.8896292669422581 28 evm.model.tig00000789.28 no hits & (original description: no original description) 0.888184054739224 38 evm.model.tig00001339.8 no hits & (original description: no original description) 0.8857749199895807 62 evm.model.tig00001254.9 no hits & (original description: no original description) 0.8847903830983407 69 evm.model.tig00000144.92 no hits & (original description: no original description) 0.8839892532683573 77 evm.model.tig00020556.40 no hits & (original description: no original description) 0.8829344871013126 61 evm.model.tig00021073.57 no hits & (original description: no original description) 0.8824078897879997 35 evm.model.tig00000388.42 no hits & (original description: no original description) 0.8822300488028849 42 evm.model.tig00021127.175 no hits & (original description: no original description) 0.8809391716074211 39 evm.model.tig00020816.27 (at1g55350 : 197.0) Similar to maize DEK1, a gene encoding a membrane protein of the calpain gene superfamily required for aleurone cell development in the endosperm of maize grains. A key component of the embryonic L1 cell-layer specification pathway.; DEFECTIVE KERNEL 1 (DEK1); FUNCTIONS IN: cysteine-type endopeptidase activity, calcium-dependent cysteine-type endopeptidase activity; INVOLVED IN: cell fate specification, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C2, calpain, domain III (InterPro:IPR022683), Peptidase C2, calpain, large subunit, domain III (InterPro:IPR022682), Peptidase, cysteine peptidase active site (InterPro:IPR000169), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Peptidase C2, calpain, catalytic domain (InterPro:IPR001300), Peptidase C2, calpain family (InterPro:IPR022684). & (reliability: 394.0) & (original description: no original description) 0.8807963304345483 40 evm.model.tig00001041.8 no hits & (original description: no original description) 0.8807771890650794 46 evm.model.tig00021238.2 no hits & (original description: no original description) 0.8787442188101316 96 evm.model.tig00020556.21 no hits & (original description: no original description) 0.8780691908264056 69 evm.model.tig00001729.1 no hits & (original description: no original description) 0.8778566560047746 44 evm.model.tig00021350.8 no hits & (original description: no original description) 0.8777504763025995 45 evm.model.tig00000403.87 (at1g28140 : 98.6) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2301, transmembrane (InterPro:IPR019275); Has 140 Blast hits to 140 proteins in 72 species: Archae - 0; Bacteria - 86; Metazoa - 10; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 197.2) & (original description: no original description) 0.8773253848904752 46 evm.model.tig00022075.75 no hits & (original description: no original description) 0.8773024073555027 63 evm.model.tig00000147.64 no hits & (original description: no original description) 0.8735960936084073 52 evm.model.tig00020830.5 (at1g15500 : 101.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 94.7) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 202.0) & (original description: no original description) 0.8715871303049127 95 evm.model.tig00000254.116 no hits & (original description: no original description) 0.8715692868139907 59 evm.model.tig00000147.58 (at1g13770 : 156.0) ROOT UV-B SENSITIVE 3 (RUS3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT3G45890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 312.0) & (original description: no original description) 0.8709582396035969 66 evm.model.tig00001086.11 no hits & (original description: no original description) 0.8700970766874564 57 evm.model.tig00020849.5 no hits & (original description: no original description) 0.8700683112770291 58 evm.model.tig00021281.29 (at3g49660 : 91.3) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 118516 Blast hits to 43755 proteins in 1024 species: Archae - 92; Bacteria - 12360; Metazoa - 47439; Fungi - 25856; Plants - 15887; Viruses - 9; Other Eukaryotes - 16873 (source: NCBI BLink). & (reliability: 181.8) & (original description: no original description) 0.8655558168340213 65 evm.model.tig00020556.14 (at2g41790 : 249.0) Insulinase (Peptidase family M16) family protein; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) family protein (TAIR:AT3G57470.2); Has 9660 Blast hits to 9541 proteins in 2186 species: Archae - 9; Bacteria - 6247; Metazoa - 831; Fungi - 633; Plants - 271; Viruses - 3; Other Eukaryotes - 1666 (source: NCBI BLink). & (reliability: 498.0) & (original description: no original description) 0.8644403448235927 74 evm.model.tig00021522.17 (at3g49660 : 156.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 118516 Blast hits to 43755 proteins in 1024 species: Archae - 92; Bacteria - 12360; Metazoa - 47439; Fungi - 25856; Plants - 15887; Viruses - 9; Other Eukaryotes - 16873 (source: NCBI BLink). & (p49026|gblp_tobac : 130.0) Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana tabacum (Common tobacco) & (reliability: 282.0) & (original description: no original description) 0.8641571284924571 67 evm.model.tig00000923.12 (at4g36760 : 492.0) Arabidopsis aminopeptidase P1; aminopeptidase P1 (APP1); FUNCTIONS IN: aminopeptidase activity, N-1-naphthylphthalamic acid binding; INVOLVED IN: auxin polar transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site (InterPro:IPR001131), Peptidase M24, structural domain (InterPro:IPR000994), Creatinase (InterPro:IPR000587); BEST Arabidopsis thaliana protein match is: Metallopeptidase M24 family protein (TAIR:AT3G05350.1); Has 10398 Blast hits to 10335 proteins in 2401 species: Archae - 277; Bacteria - 6310; Metazoa - 362; Fungi - 246; Plants - 146; Viruses - 0; Other Eukaryotes - 3057 (source: NCBI BLink). & (reliability: 984.0) & (original description: no original description) 0.8641149890136552 68 evm.model.tig00000219.20 no hits & (original description: no original description) 0.8628265701637265 89 evm.model.tig00020800.17 no hits & (original description: no original description) 0.8596311860250707 74 evm.model.tig00021623.7 no hits & (original description: no original description) 0.857494547225185 92 evm.model.tig00021582.42 no hits & (original description: no original description) 0.856449497741796 77 evm.model.tig00000025.31 (at2g43070 : 108.0) SIGNAL PEPTIDE PEPTIDASE-LIKE 3 (SPPL3); FUNCTIONS IN: peptidase activity, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plasma membrane; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 5 (TAIR:AT1G05820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description) 0.8559434638309243 78 evm.model.tig00000989.49 no hits & (original description: no original description) 0.8557906959989632 79 evm.model.tig00000741.2 no hits & (original description: no original description) 0.8548033790120336 83 evm.model.tig00020875.22 no hits & (original description: no original description) 0.8544175427890375 87 evm.model.tig00020563.156 (at5g58140 : 218.0) Membrane-bound protein serine/threonine kinase that functions as blue light photoreceptor in redundancy with PHO1. Involved in stomatal opening, chloroplast movement and phototropism. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT2 possesses two LOV (LOV1 and LOV2, for light-oxygen-voltage-sensing) domains involved in FMN-binding and a C-terminus forming a serine/threonine kinase domain. LOV2 acts as an inhibitor of phototropin kinase in the dark, and light cancels the inhibition through cysteine-FMN adduct formation. LOV1 in contrast acts as an attenuator of photoactivation. Localized to the Golgi apparatus under the induction of blue light.; phototropin 2 (PHOT2); FUNCTIONS IN: protein serine/threonine kinase activity, FMN binding, kinase activity, blue light photoreceptor activity; INVOLVED IN: in 7 processes; LOCATED IN: Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: phototropin 1 (TAIR:AT3G45780.2); Has 25181 Blast hits to 21357 proteins in 1460 species: Archae - 236; Bacteria - 6754; Metazoa - 8411; Fungi - 2718; Plants - 3113; Viruses - 9; Other Eukaryotes - 3940 (source: NCBI BLink). & (p15792|kpk1_phavu : 128.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 436.0) & (original description: no original description) 0.8525709283199359 89 evm.model.tig00001234.1 no hits & (original description: no original description) 0.8523749674528264 90 evm.model.tig00000451.18 (at1g48790 : 128.0) associated molecule with the SH3 domain of STAM 1 (AMSH1); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: associated molecule with the SH3 domain of STAM 3 (TAIR:AT4G16144.1); Has 1172 Blast hits to 1019 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 476; Fungi - 293; Plants - 278; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (reliability: 256.0) & (original description: no original description) 0.8498869103456644 97 evm.model.tig00000849.31 no hits & (original description: no original description) 0.8497183841753158 99