Sequence Description Alias PCC hrr evm.model.tig00000989.22 (at2g25680 : 119.0) Encodes a high-affinity molybdate transporter. Mutant has reduced concentrations of molybdate in roots and shoots, and reduced shoot and root length when growing on Mo-limited medium.; molybdate transporter 1 (MOT1); FUNCTIONS IN: molybdate ion transmembrane transporter activity, sulfate transmembrane transporter activity; INVOLVED IN: molybdate ion transport; LOCATED IN: mitochondrion, vacuole; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: sulfate transmembrane transporters (TAIR:AT1G80310.1); Has 761 Blast hits to 750 proteins in 291 species: Archae - 26; Bacteria - 503; Metazoa - 6; Fungi - 58; Plants - 70; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 238.0) & (original description: no original description) 0.9174683019093063 4 evm.model.tig00020816.61 no hits & (original description: no original description) 0.9148619840047875 10 evm.model.tig00000025.39 no hits & (original description: no original description) 0.8993642384419859 23 evm.model.tig00000113.15 no hits & (original description: no original description) 0.8916144202764112 57 evm.model.tig00021687.2 no hits & (original description: no original description) 0.8902544291180609 58 evm.model.tig00000248.28 no hits & (original description: no original description) 0.8894415339504959 16 evm.model.tig00000970.9 no hits & (original description: no original description) 0.8876976534186726 7 evm.model.tig00020539.52 no hits & (original description: no original description) 0.8865858254992199 30 evm.model.tig00000145.25 (at1g66340 : 80.9) Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.; ETHYLENE RESPONSE 1 (ETR1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: ethylene response sensor 1 (TAIR:AT2G40940.1); Has 102721 Blast hits to 98263 proteins in 3046 species: Archae - 757; Bacteria - 90102; Metazoa - 18; Fungi - 1611; Plants - 2314; Viruses - 21; Other Eukaryotes - 7898 (source: NCBI BLink). & (reliability: 161.8) & (original description: no original description) 0.8863873817698427 11 evm.model.tig00022080.14 no hits & (original description: no original description) 0.8847119196882994 80 evm.model.tig00021365.20 (at1g15520 : 132.0) ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.; pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink). & (q8gu92|pdr2_orysa : 129.0) Probable pleiotropic drug resistance protein 2 - Oryza sativa (Rice) & (reliability: 264.0) & (original description: no original description) 0.8845118939571189 64 evm.model.tig00000704.19 no hits & (original description: no original description) 0.883445608300487 19 evm.model.tig00020816.18 no hits & (original description: no original description) 0.8832158322731428 13 evm.model.tig00000711.43 (at1g34150 : 108.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA, C-terminal (InterPro:IPR020095), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G06950.1); Has 7569 Blast hits to 7566 proteins in 2644 species: Archae - 155; Bacteria - 5313; Metazoa - 277; Fungi - 265; Plants - 164; Viruses - 0; Other Eukaryotes - 1395 (source: NCBI BLink). & (reliability: 216.0) & (original description: no original description) 0.8827430661370916 14 evm.model.tig00020552.5 no hits & (original description: no original description) 0.8778014324899982 61 evm.model.tig00000057.87 no hits & (original description: no original description) 0.8768374187798101 18 evm.model.tig00021072.14 no hits & (original description: no original description) 0.8764598871050648 39 evm.model.tig00001127.8 no hits & (original description: no original description) 0.8763164920553942 32 evm.model.tig00000248.26 no hits & (original description: no original description) 0.8745418394967518 71 evm.model.tig00000601.10 (at2g40730 : 333.0) Protein kinase family protein with ARM repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-like helical (InterPro:IPR011989), Serine/threonine-protein kinase domain (InterPro:IPR002290), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G71410.1); Has 4566 Blast hits to 2083 proteins in 348 species: Archae - 0; Bacteria - 278; Metazoa - 876; Fungi - 585; Plants - 192; Viruses - 19; Other Eukaryotes - 2616 (source: NCBI BLink). & (reliability: 666.0) & (original description: no original description) 0.8740670550218473 24 evm.model.tig00021037.69 no hits & (original description: no original description) 0.8736705119068914 81 evm.model.tig00000403.96 (at2g17440 : 101.0) Encodes PIRL5, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.; plant intracellular ras group-related LRR 5 (PIRL5); LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 4 (TAIR:AT4G35470.1); Has 100264 Blast hits to 38283 proteins in 1358 species: Archae - 22; Bacteria - 10106; Metazoa - 37622; Fungi - 3439; Plants - 42778; Viruses - 28; Other Eukaryotes - 6269 (source: NCBI BLink). & (reliability: 187.2) & (original description: no original description) 0.8736344929856742 26 evm.model.tig00000025.40 no hits & (original description: no original description) 0.8729908662888036 52 evm.model.tig00020710.14 no hits & (original description: no original description) 0.8723996636804419 46 evm.model.tig00020904.161 no hits & (original description: no original description) 0.8716841408746939 29 evm.model.tig00000157.45 no hits & (original description: no original description) 0.871369397981843 84 evm.model.tig00000455.25 no hits & (original description: no original description) 0.8688089176847471 90 evm.model.tig00020938.15 no hits & (original description: no original description) 0.8678650096887627 36 evm.model.tig00000158.114 no hits & (original description: no original description) 0.8671660463225217 37 evm.model.tig00000113.12 no hits & (original description: no original description) 0.8659954198126323 38 evm.model.tig00000113.10 no hits & (original description: no original description) 0.865551374414163 42 evm.model.tig00001021.2 (at3g04240 : 193.0) Has O-linked N-acetyl glucosamine transferase activity. Similar to Arabidopsis SPY gene.; secret agent (SEC); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 114710 Blast hits to 35863 proteins in 2480 species: Archae - 3197; Bacteria - 54774; Metazoa - 16661; Fungi - 4580; Plants - 3873; Viruses - 0; Other Eukaryotes - 31625 (source: NCBI BLink). & (q6yzi0|spy_orysa : 80.1) Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-) - Oryza sativa (Rice) & (reliability: 386.0) & (original description: no original description) 0.8652110471955055 40 evm.model.tig00020710.13 no hits & (original description: no original description) 0.8630448435199071 45 evm.model.tig00001657.2 no hits & (original description: no original description) 0.8606738679555866 63 evm.model.tig00020909.12 (at5g10480 : 142.0) Protein tyrosine phosphatase-like involved in cell division and differentiation. Interacts with CDKA;1 only in its phosphorylated form, preventing dephosphorylation. Overexpression slowed down cell division in suspension cell cultures at the G2-to-M transition and early mitosis and inhibited Arabidopsis seedling growth. Localized in the cytoplasm of dividing cells but moved into the nucleus upon cell differentiation. Based on complementation of yeast mutant PAS2 has acyl-CoA dehydratase activity. It interacts with CER10, a component of the microsomal fatty acid elongase complex, suggesting a role in synthesis of VLCFAs (very long chain fatty acids).; PASTICCINO 2 (PAS2); CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase-like, PTPLA (InterPro:IPR007482); BEST Arabidopsis thaliana protein match is: Protein-tyrosine phosphatase-like, PTPLA (TAIR:AT5G59770.1). & (reliability: 284.0) & (original description: no original description) 0.8597070640817338 50 evm.model.tig00000178.61 (at5g35840 : 123.0) Encodes the apoprotein of phytochrome;one of a family of photoreceptors that modulate plant growth and development.; phytochrome C (PHYC); FUNCTIONS IN: protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Phytochrome, central region (InterPro:IPR013515), Signal transduction histidine kinase, core (InterPro:IPR005467), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Phytochrome chromophore attachment domain (InterPro:IPR016132), ATPase-like, ATP-binding domain (InterPro:IPR003594), PAS fold-2 (InterPro:IPR013654), Phytochrome A/B/C/D/E (InterPro:IPR012129), Phytochrome (InterPro:IPR001294), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Phytochrome chromophore binding site (InterPro:IPR013516), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: phytochrome A (TAIR:AT1G09570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9zwi9|phyc_orysa : 118.0) Phytochrome C - Oryza sativa (Rice) & (reliability: 228.0) & (original description: no original description) 0.859383525668313 51 evm.model.tig00021432.22 no hits & (original description: no original description) 0.8592497188128434 53 evm.model.tig00020563.135 (at1g79450 : 141.0) ALA-interacting subunit 5 (ALIS5); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen, plasma membrane, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein (TAIR:AT1G16360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 282.0) & (original description: no original description) 0.857428641559768 56 evm.model.tig00021319.9 no hits & (original description: no original description) 0.8565971220936537 59 evm.model.tig00000821.42 no hits & (original description: no original description) 0.8529365156464885 61 evm.model.tig00020904.12 no hits & (original description: no original description) 0.8514971912581791 64 evm.model.tig00020660.40 no hits & (original description: no original description) 0.8504258290726624 66 evm.model.tig00020675.43 (at2g47160 : 145.0) Boron transporter. Protein accumulates in shoots and roots under conditions of boron deficiency and is degraded within several hours of restoring boron supply. Localized to the plasma membrane under B limitation, and to the cytoplasm after B application before degradation. Protein is transferred via the endosomes to the vacuole for degradation. Localized to the inner plasma membrane domain in the columella, lateral root cap, epidermis, and endodermis in the root tip region, and in the epidermis and endodermis in the elongation zone. Under high-boron is transported to the vacuole for degradation.; REQUIRES HIGH BORON 1 (BOR1); CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, eukaryotic (InterPro:IPR003020), Bicarbonate transporter, C-terminal (InterPro:IPR011531); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT3G62270.1); Has 2632 Blast hits to 1400 proteins in 192 species: Archae - 0; Bacteria - 6; Metazoa - 1971; Fungi - 316; Plants - 233; Viruses - 2; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 290.0) & (original description: no original description) 0.8495726329310594 69 evm.model.tig00000227.8 (at2g29940 : 177.0) pleiotropic drug resistance 3 (PDR3); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: drug transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 12 (TAIR:AT1G15520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5w274|pdr3_tobac : 136.0) Pleiotropic drug resistance protein 3 (NtPDR3) - Nicotiana tabacum (Common tobacco) & (reliability: 354.0) & (original description: no original description) 0.8494975857315415 78 evm.model.tig00000823.10 no hits & (original description: no original description) 0.8482324278275926 72 evm.model.tig00000692.59 (at5g54140 : 170.0) encodes a protein similar to IAA amino acid conjugate hydrolase; IAA-leucine-resistant (ILR1)-like 3 (ILL3); FUNCTIONS IN: metallopeptidase activity, IAA-amino acid conjugate hydrolase activity; INVOLVED IN: proteolysis, auxin metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439); BEST Arabidopsis thaliana protein match is: peptidase M20/M25/M40 family protein (TAIR:AT1G51760.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 340.0) & (original description: no original description) 0.8477443099625269 74 evm.model.tig00000980.29 no hits & (original description: no original description) 0.8471292844674413 75 evm.model.tig00021489.26 no hits & (original description: no original description) 0.846868902817826 83 evm.model.tig00000605.26 no hits & (original description: no original description) 0.8450158586405361 82 evm.model.tig00021244.19 (at4g34110 : 249.0) Putative poly-A binding protein. Member of a gene family .Expressed in stele and root meristem and post-fertilization ovules.Member of the class II family of PABP proteins.; poly(A) binding protein 2 (PAB2); FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: response to salt stress, translational initiation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2); Has 987994 Blast hits to 947802 proteins in 35008 species: Archae - 20430; Bacteria - 568582; Metazoa - 213912; Fungi - 30250; Plants - 62241; Viruses - 64851; Other Eukaryotes - 27728 (source: NCBI BLink). & (q08935|roc1_nicsy : 85.9) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (reliability: 498.0) & (original description: no original description) 0.8416677193542901 90 evm.model.tig00021037.70 no hits & (original description: no original description) 0.8399986889757701 94 evm.model.tig00020675.87 no hits & (original description: no original description) 0.8399871730531879 95 evm.model.tig00021168.56 no hits & (original description: no original description) 0.8394253942327151 96 evm.model.tig00021350.4 no hits & (original description: no original description) 0.8386972827260994 99