Expression profile for evm.model.tig00000403.40 (evm.model.tig00000403.40)

Description : (at1g29630 : 229.0) 5'-3' exonuclease family protein; FUNCTIONS IN: DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G18090.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 458.0) & (original description: no original description)

Condition specificity: 11 h after light (SPM: 0.5, entropy: 3.08, tau: 0.54)
Tissue specificity: Noon (SPM: 0.62, entropy: 1.92, tau: 0.5)
ZT time: ZT8-11 (SPM: 0.61, entropy: 2.25, tau: 0.48)

All conditions


Tissue specificity

Note: SPM calculations for this profile are done using the maximum value.


ZT time

Note: SPM calculations for this profile are done using the maximum value.