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Expression profile for evm.model.tig00000025.27 (evm.model.tig00000025.27)

Description : (at5g23670 : 516.0) Encodes the LCB2 subunit of serine palmitoyltransferase, an enzyme involved in sphingosine biosynthesis. The protein is localized to the endoplasmic reticulum.; long chain base2 (LCB2); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class-II, pyridoxal-phosphate binding site (InterPro:IPR001917), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: serine palmitoyltransferase 1 (TAIR:AT3G48780.1); Has 10446 Blast hits to 10416 proteins in 2172 species: Archae - 77; Bacteria - 7037; Metazoa - 738; Fungi - 589; Plants - 234; Viruses - 9; Other Eukaryotes - 1762 (source: NCBI BLink). & (reliability: 1032.0) & (original description: no original description)

Condition specificity: 3 h after light (SPM: 0.41, entropy: 2.69, tau: 0.35)
Tissue specificity: Morning (SPM: 0.54, entropy: 2.25, tau: 0.33)
ZT time: ZT0-3 (SPM: 0.55, entropy: 2.58, tau: 0.34)