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Expression profile for evm.model.tig00021254.2 (evm.model.tig00021254.2)

Attention: This gene has low abundance.

Description : (at3g17040 : 186.0) It is a RNA tetratricopeptide repeat-containing protein required for normal processing of transcripts from the polycistronic chloroplast psbB-psbT-psbH-petB-petD operon coding for proteins of the photosystem II and cytochrome b6/f complexes. Localizes to the chloroplast membrane. Involved in regulating plastidial gene expression and biogenesis.; high chlorophyll fluorescent 107 (HCF107); FUNCTIONS IN: binding; INVOLVED IN: plastid organization, RNA processing, regulation of translation; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: pre-mRNA splicing factor-related (TAIR:AT4G03430.1). & (q9fns4|mbb1_chlre : 180.0) PsbB mRNA maturation factor Mbb1, chloroplast precursor - Chlamydomonas reinhardtii & (reliability: 372.0) & (original description: no original description)

Condition specificity: 1 h after light (SPM: 0.48, entropy: 2.75, tau: 0.48)
Tissue specificity: Dawn (SPM: 0.58, entropy: 1.46, tau: 0.4)
ZT time: ZT0-3 (SPM: 0.63, entropy: 2.25, tau: 0.46)