Expression profile for evm.model.tig00021350.13 (evm.model.tig00021350.13)

Description : (at3g62770 : 215.0) Required for autophagosome formation during nutrient deprivation and senescence.; AtATG18a; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: autophagy, leaf senescence, response to starvation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: homolog of yeast autophagy 18 (ATG18) D (TAIR:AT3G56440.1); Has 213 Blast hits to 211 proteins in 57 species: Archae - 0; Bacteria - 30; Metazoa - 48; Fungi - 45; Plants - 63; Viruses - 2; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 430.0) & (original description: no original description)

Condition specificity: 7 h after dark (SPM: 0.4, entropy: 2.86, tau: 0.32)
Tissue specificity: Dawn (SPM: 0.5, entropy: 2.25, tau: 0.22)
ZT time: ZT20-23 (SPM: 0.52, entropy: 2.25, tau: 0.27)

All conditions


Tissue specificity

Note: SPM calculations for this profile are done using the maximum value.


ZT time

Note: SPM calculations for this profile are done using the maximum value.