Expression profile for evm.model.tig00001408.10 (evm.model.tig00001408.10)

Description : (q39571|yptc1_chlre : 321.0) GTP-binding protein YPTC1 - Chlamydomonas reinhardtii & (at5g47200 : 306.0) RAB GTPase homolog 1A (RAB1A); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 1C (TAIR:AT4G17530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 612.0) & (original description: no original description)

Condition specificity: 13 h after light (SPM: 0.37, entropy: 3.08, tau: 0.26)
Tissue specificity: Dusk (SPM: 0.51, entropy: 2.25, tau: 0.25)
ZT time: ZT12-15 (SPM: 0.49, entropy: 2.58, tau: 0.22)

All conditions


Tissue specificity

Note: SPM calculations for this profile are done using the maximum value.


ZT time

Note: SPM calculations for this profile are done using the maximum value.