Expression profile for evm.model.tig00000025.21 (evm.model.tig00000025.21)


Attention: This gene has low abundance.

Description : (at3g19440 : 138.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G78910.1); Has 18366 Blast hits to 18356 proteins in 2657 species: Archae - 12; Bacteria - 13665; Metazoa - 270; Fungi - 217; Plants - 245; Viruses - 0; Other Eukaryotes - 3957 (source: NCBI BLink). & (reliability: 276.0) & (original description: no original description)

Condition specificity: 3 h after dark (SPM: 0.35, entropy: 2.69, tau: 0.21)
Tissue specificity: Night (SPM: 0.46, entropy: 1.92, tau: 0.14)
ZT time: ZT16-19 (SPM: 0.47, entropy: 1.92, tau: 0.18)

All conditions


Tissue specificity

Note: SPM calculations for this profile are done using the maximum value.


ZT time

Note: SPM calculations for this profile are done using the maximum value.