Expression profile for evm.model.tig00000692.32 (evm.model.tig00000692.32)

Description : (at4g19490 : 98.2) Putative homolog of yeast Vps54. Thought to associate with POK and ATVPS53 in a plant GARP-like complex involved in the membrane trafficking system.; VPS54; INVOLVED IN: retrograde transport, endosome to Golgi; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515), Vps54-like (InterPro:IPR012501); Has 471 Blast hits to 377 proteins in 168 species: Archae - 2; Bacteria - 4; Metazoa - 149; Fungi - 188; Plants - 45; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (reliability: 196.4) & (original description: no original description)

Condition specificity: 3 h after light (SPM: 0.39, entropy: 3.08, tau: 0.31)
Tissue specificity: Morning (SPM: 0.5, entropy: 2.25, tau: 0.23)
ZT time: ZT0-3 (SPM: 0.5, entropy: 1.92, tau: 0.23)

All conditions


Tissue specificity

Note: SPM calculations for this profile are done using the maximum value.


ZT time

Note: SPM calculations for this profile are done using the maximum value.