Expression profile for evm.model.tig00020806.25 (evm.model.tig00020806.25)


Attention: This gene has low abundance.

Description : (at4g11080 : 83.2) HMG (high mobility group) box protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: HMG (high mobility group) box protein (TAIR:AT4G23800.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 166.4) & (original description: no original description)

Condition specificity: 3 h after light (SPM: 0.57, entropy: 1.78, tau: 0.75)
Tissue specificity: Morning (SPM: 0.58, entropy: 1.92, tau: 0.52)
ZT time: ZT0-3 (SPM: 0.58, entropy: 1.92, tau: 0.52)

All conditions


Tissue specificity

Note: SPM calculations for this profile are done using the maximum value.


ZT time

Note: SPM calculations for this profile are done using the maximum value.