Expression profile for Kfl00136_0260 (Kfl00136_0260)

Aliases : kfl00136_0260_v1.1

Description : (at1g30460 : 427.0) Encodes AtCPSF30, the 30-KDa subunit of cleavage and polyadenylation specificity factor. AtCPSF30 is a probable processing endonuclease. Nucleus-localized RNA binding protein capable of interacting with itself and with calmodulin. Its RNA-binding activity is inhibited by calmodulin in a calcium-dependent fashion.; cleavage and polyadenylation specificity factor 30 (CPSF30); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G21580.1); Has 1436 Blast hits to 1371 proteins in 231 species: Archae - 0; Bacteria - 2; Metazoa - 545; Fungi - 336; Plants - 156; Viruses - 9; Other Eukaryotes - 388 (source: NCBI BLink). & (reliability: 854.0) & (original description: no original description)

Condition specificity: 5 h after light (SPM: 0.51, entropy: 3.25, tau: 0.54)
Tissue specificity: Morning (SPM: 0.64, entropy: 2.58, tau: 0.5)
ZT time: ZT4-7 (SPM: 0.66, entropy: 2.58, tau: 0.52)

All conditions


Tissue specificity

Note: SPM calculations for this profile are done using the maximum value.


ZT time

Note: SPM calculations for this profile are done using the maximum value.