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Expression profile for Kfl00092_0040 (Kfl00092_0040)

Aliases : kfl00092_0040_v1.1, kfl00092_0040_v1.1

Description : (at1g29400 : 310.0) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.; MEI2-like protein 5 (ML5); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 3 (TAIR:AT4G18120.2); Has 6281 Blast hits to 5530 proteins in 358 species: Archae - 4; Bacteria - 106; Metazoa - 3185; Fungi - 1006; Plants - 1245; Viruses - 0; Other Eukaryotes - 735 (source: NCBI BLink). & (q27k34|pla2_orysa : 128.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 620.0) & (original description: no original description)

Condition specificity: 5 h after light (SPM: 0.75, entropy: 2.63, tau: 0.8)
Tissue specificity: Morning (SPM: 0.78, entropy: 2.58, tau: 0.71)
ZT time: ZT4-7 (SPM: 0.79, entropy: 2.25, tau: 0.73)