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Expression profile for Kfl00560_0080 (Kfl00560_0080)

Aliases : kfl00560_0080_v1.1

Description : (at1g07910 : 734.0) Encodes a tRNA ligase that resembles the yeast Trl1 RNA ligase in structure and function but very different in sequence. Like Trl1, AtRNL consists of two domains ó an N-terminal ligase component and a C-terminal 5'-kinase/2',3'-cyclic phosphodiesterase (CPD) componentó that can function in tRNA splicing in vivo when expressed as separate polypeptides. Requires a 2'-PO4 end for tRNA splicing in vivo.; RNAligase (RNL); CONTAINS InterPro DOMAIN/s: tRNA ligase, phosphodiesterase, fungi (InterPro:IPR015965); Has 209 Blast hits to 196 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 200; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 1468.0) & (original description: no original description)

Condition specificity: 1 h after dark (SPM: 0.34, entropy: 2.42, tau: 0.16)
Tissue specificity: Dusk (SPM: 0.46, entropy: 2.25, tau: 0.13)
ZT time: ZT12-15 (SPM: 0.46, entropy: 1.92, tau: 0.15)