Expression profile for MA_158278g0010 (MA_158278g0010)

Description : (at5g21150 : 237.0) AGO9-dependent sRNA silencing is crucial to specify cell fate in the Arabidopsis ovule. AGO9 is expressed in reproductive companion cells but not in the associated male or female gametes or their precursors. Therefore, AGO9 acts non-cell autonomously to silencing the activity of TEs activity in the female gametophyte.; ARGONAUTE 9 (AGO9); FUNCTIONS IN: siRNA binding; INVOLVED IN: ovule development, negative regulation of transposition; LOCATED IN: cytoplasm; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Argonaute/Dicer protein, PAZ (InterPro:IPR003100); BEST Arabidopsis thaliana protein match is: Argonaute family protein (TAIR:AT2G27040.2); Has 1875 Blast hits to 1834 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 980; Fungi - 283; Plants - 463; Viruses - 0; Other Eukaryotes - 149 (source: NCBI BLink). & (reliability: 474.0) & (original description: no original description)

Condition specificity: 5 h after light (SPM: 0.34, entropy: 2.63, tau: 0.18)
Tissue specificity: Morning (SPM: 0.45, entropy: 2.25, tau: 0.12)
ZT time: ZT4-7 (SPM: 0.46, entropy: 1.92, tau: 0.14)

All conditions


Tissue specificity

Note: SPM calculations for this profile are done using the maximum value.


ZT time

Note: SPM calculations for this profile are done using the maximum value.