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3. MA_26178g0010

Expression profile for MA_26178g0010 (MA_26178g0010)

Attention: This gene has low abundance.

Description : (at4g13460 : 184.0) Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation.; SU(VAR)3-9 homolog 9 (SUVH9); FUNCTIONS IN: zinc ion binding, histone-lysine N-methyltransferase activity; INVOLVED IN: DNA mediated transformation; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 2 (TAIR:AT2G33290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 368.0) & (original description: no original description)

Condition specificity: 7 h after dark (SPM: 0.39, entropy: 2.58, tau: 0.29)
Tissue specificity: Dawn (SPM: 0.51, entropy: 2.25, tau: 0.24)
ZT time: ZT20-23 (SPM: 0.5, entropy: 2.25, tau: 0.24)