Expression profile for MA_138612g0010 (MA_138612g0010)

Description : (at5g22880 : 173.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o22582|h2b_goshi : 171.0) Histone H2B - Gossypium hirsutum (Upland cotton) & (reliability: 346.0) & (original description: no original description)

Condition specificity: 5 h after dark (SPM: 0.35, entropy: 2.19, tau: 0.19)
Tissue specificity: Midnight (SPM: 0.46, entropy: 1.46, tau: 0.13)
ZT time: ZT20-23 (SPM: 0.46, entropy: 1.92, tau: 0.14)

All conditions


Tissue specificity

Note: SPM calculations for this profile are done using the maximum value.


ZT time

Note: SPM calculations for this profile are done using the maximum value.