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3. MA_10434586g0010

Expression profile for MA_10434586g0010 (MA_10434586g0010)

Attention: This gene has low abundance.

Description : (at2g41500 : 508.0) Encodes LACHESIS (LIS), a protein with seven WD40 repeats. LIS is homologous to the yeast splicing factor PRP4 which is associated with the U4/U6 complex of the spliceosome. LIS is involved in a mechanism that prevents accessory cells from adopting gametic cell fate: lis mutant forms supernumerary egg cells.; LACHESIS (LIS); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), Pre-mRNA processing factor 4 (PRP4) like (InterPro:IPR014906), WD40 repeat (InterPro:IPR001680), Splicing factor motif (InterPro:IPR003648), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G05720.1); Has 96331 Blast hits to 36444 proteins in 930 species: Archae - 78; Bacteria - 11869; Metazoa - 38307; Fungi - 21059; Plants - 12275; Viruses - 15; Other Eukaryotes - 12728 (source: NCBI BLink). & (q39336|gblp_brana : 108.0) Guanine nucleotide-binding protein subunit beta-like protein - Brassica napus (Rape) & (reliability: 1016.0) & (original description: no original description)

Condition specificity: 1 h after dark (SPM: 0.34, entropy: 2.69, tau: 0.17)
Tissue specificity: Night (SPM: 0.46, entropy: 1.92, tau: 0.13)
ZT time: ZT16-19 (SPM: 0.46, entropy: 2.25, tau: 0.13)