Expression profile for MA_10428603g0020 (MA_10428603g0020)


Attention: This gene has low abundance.

Description : (at1g67750 : 571.0) Pectate lyase family protein; FUNCTIONS IN: pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G63180.1); Has 1739 Blast hits to 1731 proteins in 272 species: Archae - 0; Bacteria - 767; Metazoa - 0; Fungi - 258; Plants - 701; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p40973|pel_lillo : 403.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (reliability: 1142.0) & (original description: no original description)

Condition specificity: 5 h after dark (SPM: 0.47, entropy: 3.42, tau: 0.54)
Tissue specificity: Midnight (SPM: 0.49, entropy: 2.58, tau: 0.22)
ZT time: ZT20-23 (SPM: 0.52, entropy: 2.58, tau: 0.31)

All conditions


Tissue specificity

Note: SPM calculations for this profile are done using the maximum value.


ZT time

Note: SPM calculations for this profile are done using the maximum value.