Expression profile for MA_86558g0010 (MA_86558g0010)


Attention: This gene has low abundance.

Description : (at1g61040 : 155.0) Encodes a yeast Paf1C subunit homolog required for the expression of the MADS box gene FLC and other members of the FLC/MAF MADS-box gene family.; vernalization independence 5 (VIP5); FUNCTIONS IN: DNA binding; INVOLVED IN: positive regulation of transcription, DNA-dependent, negative regulation of flower development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plus-3 domain, subgroup (InterPro:IPR018144), Plus-3 (InterPro:IPR004343); Has 7244 Blast hits to 3723 proteins in 490 species: Archae - 2; Bacteria - 3364; Metazoa - 2087; Fungi - 627; Plants - 250; Viruses - 32; Other Eukaryotes - 882 (source: NCBI BLink). & (reliability: 310.0) & (original description: no original description)

Condition specificity: 9 h after light (SPM: 0.74, entropy: 2.05, tau: 0.82)
Tissue specificity: Noon (SPM: 0.79, entropy: 2.25, tau: 0.72)
ZT time: ZT8-11 (SPM: 0.79, entropy: 2.25, tau: 0.76)

All conditions


Tissue specificity

Note: SPM calculations for this profile are done using the maximum value.


ZT time

Note: SPM calculations for this profile are done using the maximum value.