1. Home
2. Expression Profile
3. evm.model.contig_641.1

Expression profile for evm.model.contig_641.1 (evm.model.contig_641.1)

Attention: This gene has low abundance.

Description : (q9mus5|rpob_mesvi : 488.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Mesostigma viride & (atcg00190 : 340.0) Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution.; RNA polymerase subunit beta (RPOB); FUNCTIONS IN: DNA-directed RNA polymerase activity, protein binding; INVOLVED IN: RNA elongation; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), DNA-directed RNA polymerase, beta subunit, bacterial-type (InterPro:IPR010243), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT4G21710.1). & (reliability: 680.0) & (original description: no original description)

Condition specificity: 7 h after dark (SPM: 0.58, entropy: 2.75, tau: 0.67)
Tissue specificity: Midnight (SPM: 0.65, entropy: 1.92, tau: 0.58)
ZT time: ZT16-19 (SPM: 0.73, entropy: 2.25, tau: 0.67)