Expression profile for evm.model.contig_2062.18 (evm.model.contig_2062.18)

Description : (at3g18480 : 100.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component, known as a golgin in mammals and yeast. A fluorescently-tagged version of CASP co-localizes with Golgi markers, and this localization appears to require the C-terminal (565ñ689aa) portion of the protein. The protein is inserted into a membrane in a type II orientation.; CCAAT-displacement protein alternatively spliced product (CASP); INVOLVED IN: intra-Golgi vesicle-mediated transport; LOCATED IN: integral to membrane, Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CASP, C-terminal (InterPro:IPR012955); Has 108439 Blast hits to 62245 proteins in 2877 species: Archae - 1242; Bacteria - 16953; Metazoa - 49041; Fungi - 8922; Plants - 5181; Viruses - 394; Other Eukaryotes - 26706 (source: NCBI BLink). & (reliability: 200.0) & (original description: no original description)

Condition specificity: 3 h after light (SPM: 0.39, entropy: 2.42, tau: 0.31)
Tissue specificity: Morning (SPM: 0.5, entropy: 1.58, tau: 0.23)
ZT time: ZT0-3 (SPM: 0.54, entropy: 1.79, tau: 0.3)

All conditions


Tissue specificity

Note: SPM calculations for this profile are done using the maximum value.


ZT time

Note: SPM calculations for this profile are done using the maximum value.