Expression profile for evm.model.contig_2346.7 (evm.model.contig_2346.7)

Description : (at4g29860 : 90.1) Encodes a WD repeat protein with seven WD repeat motifs, predicted to function in protein-protein interaction. Mutations caused defects in both embryo and seedling development.; EMBRYO DEFECTIVE 2757 (EMB2757); FUNCTIONS IN: nucleotide binding; INVOLVED IN: acquisition of desiccation tolerance, embryo development, embryo development ending in seed dormancy; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: stem, rosette leaf, fruit, root, cultured cell; EXPRESSED DURING: F mature embryo stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G11160.1); Has 24053 Blast hits to 12842 proteins in 620 species: Archae - 42; Bacteria - 6408; Metazoa - 6694; Fungi - 5230; Plants - 2600; Viruses - 0; Other Eukaryotes - 3079 (source: NCBI BLink). & (reliability: 180.2) & (original description: no original description)

Condition specificity: 11 h after light (SPM: 0.4, entropy: 3.02, tau: 0.31)
Tissue specificity: Dusk (SPM: 0.51, entropy: 2.58, tau: 0.26)
ZT time: ZT8-11 (SPM: 0.53, entropy: 2.58, tau: 0.29)

All conditions


Tissue specificity

Note: SPM calculations for this profile are done using the maximum value.


ZT time

Note: SPM calculations for this profile are done using the maximum value.