Expression profile for evm.model.contig_542.1 (evm.model.contig_542.1)

Description : (p36863|yptv4_volca : 302.0) GTP-binding protein yptV4 (RAB2 homolog) - Volvox carteri & (at4g17170 : 295.0) member of RAB gene family; RAB GTPase homolog B1C (RABB1C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ER to Golgi vesicle-mediated transport, pollen sperm cell differentiation, cell growth; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: GTP-binding 2 (TAIR:AT4G35860.1); Has 27116 Blast hits to 27043 proteins in 734 species: Archae - 17; Bacteria - 131; Metazoa - 14131; Fungi - 4055; Plants - 2966; Viruses - 20; Other Eukaryotes - 5796 (source: NCBI BLink). & (reliability: 590.0) & (original description: no original description)

Condition specificity: 1 h after light (SPM: 0.52, entropy: 2.08, tau: 0.51)
Tissue specificity: Dawn (SPM: 0.63, entropy: 1.92, tau: 0.45)
ZT time: ZT0-3 (SPM: 0.67, entropy: 1.79, tau: 0.51)

All conditions


Tissue specificity

Note: SPM calculations for this profile are done using the maximum value.


ZT time

Note: SPM calculations for this profile are done using the maximum value.