Expression profile for evm.model.contig_626.2 (evm.model.contig_626.2)

Description : (at1g08190 : 125.0) Might be involved in protein sorting to the vacuole.; vacuolar protein sorting 41 (VPS41); FUNCTIONS IN: binding, nucleotide binding, zinc ion binding; INVOLVED IN: gravitropism, protein targeting to vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type (InterPro:IPR001841), WD40 repeat (InterPro:IPR001680), Vacuolar protein sorting-associated protein 41 (InterPro:IPR016902), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781), Clathrin, heavy chain/VPS, 7-fold repeat (InterPro:IPR000547); Has 13288 Blast hits to 4251 proteins in 360 species: Archae - 4; Bacteria - 340; Metazoa - 7814; Fungi - 1141; Plants - 584; Viruses - 346; Other Eukaryotes - 3059 (source: NCBI BLink). & (reliability: 250.0) & (original description: no original description)

Condition specificity: 1 h after light (SPM: 0.38, entropy: 2.79, tau: 0.28)
Tissue specificity: Dawn (SPM: 0.47, entropy: 1.79, tau: 0.17)
ZT time: ZT0-3 (SPM: 0.5, entropy: 2.25, tau: 0.24)

All conditions


Tissue specificity

Note: SPM calculations for this profile are done using the maximum value.


ZT time

Note: SPM calculations for this profile are done using the maximum value.