Expression profile for PSME_00030090-RA (PSME_00030090-RA)


Attention: This gene has low abundance.

Description : (q71vm4|ima1a_orysa : 394.0) Importin alpha-1a subunit - Oryza sativa (Rice) & (at4g16143 : 380.0) Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.; importin alpha isoform 2 (IMPA-2); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 1 (TAIR:AT3G06720.2); Has 4654 Blast hits to 3364 proteins in 293 species: Archae - 4; Bacteria - 33; Metazoa - 1869; Fungi - 640; Plants - 1336; Viruses - 0; Other Eukaryotes - 772 (source: NCBI BLink). & (reliability: 760.0) & (original description: no original description)

Condition specificity: 7 h after light (SPM: 0.71, entropy: 0.92, tau: 0.8)
Tissue specificity: Noon (SPM: 0.71, entropy: 0.92, tau: 0.8)
ZT time: ZT4-7 (SPM: 0.71, entropy: 0.92, tau: 0.8)

All conditions


Tissue specificity

Note: SPM calculations for this profile are done using the maximum value.


ZT time

Note: SPM calculations for this profile are done using the maximum value.