Expression profile for PSME_00014400-RA (PSME_00014400-RA)


Attention: This gene has low abundance.

Description : (at1g10640 : 150.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Parallel beta-helix repeat (InterPro:IPR006626), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G60590.1); Has 4327 Blast hits to 4306 proteins in 507 species: Archae - 6; Bacteria - 1323; Metazoa - 14; Fungi - 1302; Plants - 1545; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (p48979|pglr_prupe : 98.6) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach) & (reliability: 300.0) & (original description: no original description)

Condition specificity: 6 h after dark (SPM: 0.73, entropy: 1.79, tau: 0.74)
Tissue specificity: Midnight (SPM: 0.73, entropy: 1.79, tau: 0.74)
ZT time: ZT16-19 (SPM: 0.73, entropy: 1.79, tau: 0.74)

All conditions


Tissue specificity

Note: SPM calculations for this profile are done using the maximum value.


ZT time

Note: SPM calculations for this profile are done using the maximum value.