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  5. Mp1g02450.1

Mp1g02450.1


Description : platform ATPase (CDC48)


Gene families : OG_42_0000328 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp1g02450.1
Cluster HCAA Clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cre06.g269950 No alias ATPase, AAA-type, CDC48 protein 0.02 Orthogroups_2024-Update
Glyma.13G323600 No alias ATPase, AAA-type, CDC48 protein 0.02 Orthogroups_2024-Update
MA_10168585g0010 No alias (at3g53230 : 1187.0) ATPase, AAA-type, CDC48 protein;... 0.02 Orthogroups_2024-Update
PSME_00007725-RA No alias (at3g53230 : 1417.0) ATPase, AAA-type, CDC48 protein;... 0.02 Orthogroups_2024-Update
Seita.9G239600.1 No alias platform ATPase CDC48 0.02 Orthogroups_2024-Update
evm.model.tig00021463.11 No alias (at3g09840 : 945.0) Encodes a cell division cycle... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006665 sphingolipid metabolic process IEP Predicted GO
BP GO:0006672 ceramide metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 244 373
IPR003959 ATPase_AAA_core 517 650
IPR004201 Cdc48_dom2 131 193
IPR015415 Vps4_C 723 763
IPR003338 CDC4_N-term_subdom 29 110
No external refs found!