Mp1g03220.1

Description : Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis thaliana (sp|q9fps2|ubp25_arath : 331.0)

Gene families : OG_42_0000241 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000241_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha: Mp1g03220.1
Cluster	HCAA Clusters: Cluster_111

Target	Alias	Description	ECC score	Gene Family Method
At1g17110	No alias	Ubiquitin-specific protease 15...	0.02	Orthogroups_2024-Update
Bradi3g09260	No alias	ubiquitin-specific protease 15	0.02	Orthogroups_2024-Update
Cre14.g629300	No alias	ubiquitin-specific protease 23	0.01	Orthogroups_2024-Update
GRMZM2G305426	No alias	ubiquitin-specific protease 16	0.02	Orthogroups_2024-Update
Glyma.02G203500	No alias	ubiquitin-specific protease 23	0.02	Orthogroups_2024-Update
Glyma.04G058300	No alias	ubiquitin-specific protease 19	0.02	Orthogroups_2024-Update
Glyma.04G091700	No alias	ubiquitin-specific protease 16	0.02	Orthogroups_2024-Update
Kfl00042_0090	kfl00042_0090_v1....	(at1g32850 : 120.0) ubiquitin-specific protease 11...	0.02	Orthogroups_2024-Update
LOC_Os05g43480	No alias	ubiquitin carboxyl-terminal hydrolase domain containing...	0.01	Orthogroups_2024-Update
LOC_Os06g08530	No alias	ubiquitin carboxyl-terminal hydrolase domain containing...	0.01	Orthogroups_2024-Update
LOC_Os08g37350	No alias	ubiquitin carboxyl-terminal hydrolase family protein, expressed	0.02	Orthogroups_2024-Update
MA_834843g0010	No alias	(at4g17895 : 166.0) Encodes a ubiquitin-specific...	0.02	Orthogroups_2024-Update
Seita.1G350200.1	No alias	deubiquitinase *(UBP23)	0.02	Orthogroups_2024-Update
Solyc07g061780	No alias	Ubiquitin carboxyl-terminal hydrolase 15-like protein...	0.02	Orthogroups_2024-Update
evm.model.contig_2104.16	No alias	(at5g57990 : 199.0) Encodes a ubiquitin-specific...	0.01	Orthogroups_2024-Update
evm.model.tig00000711.8	No alias	(at5g57990 : 175.0) Encodes a ubiquitin-specific...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	16Dec
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein-specific protease activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	IEA	16Dec
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	ubiquitinyl hydrolase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Predicted GO
BP	GO:0000350	generation of catalytic spliceosome for second transesterification step	IEP	Predicted GO
BP	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	IEP	Predicted GO
MF	GO:0003909	DNA ligase activity	IEP	Predicted GO
MF	GO:0003911	DNA ligase (NAD+) activity	IEP	Predicted GO
MF	GO:0003950	NAD+ ADP-ribosyltransferase activity	IEP	Predicted GO
MF	GO:0004057	arginyltransferase activity	IEP	Predicted GO
MF	GO:0004672	protein kinase activity	IEP	Predicted GO
MF	GO:0004814	arginine-tRNA ligase activity	IEP	Predicted GO
MF	GO:0005488	binding	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
CC	GO:0005643	nuclear pore	IEP	Predicted GO
CC	GO:0005730	nucleolus	IEP	Predicted GO
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006364	rRNA processing	IEP	Predicted GO
BP	GO:0006401	RNA catabolic process	IEP	Predicted GO
BP	GO:0006420	arginyl-tRNA aminoacylation	IEP	Predicted GO
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Predicted GO
MF	GO:0008270	zinc ion binding	IEP	Predicted GO
BP	GO:0016070	RNA metabolic process	IEP	Predicted GO
BP	GO:0016072	rRNA metabolic process	IEP	Predicted GO
MF	GO:0016301	kinase activity	IEP	Predicted GO
BP	GO:0016598	protein arginylation	IEP	Predicted GO
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Predicted GO
MF	GO:0016755	transferase activity, transferring amino-acyl groups	IEP	Predicted GO
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predicted GO
MF	GO:0016886	ligase activity, forming phosphoric ester bonds	IEP	Predicted GO
MF	GO:0017056	structural constituent of nuclear pore	IEP	Predicted GO
BP	GO:0022618	ribonucleoprotein complex assembly	IEP	Predicted GO
BP	GO:0030490	maturation of SSU-rRNA	IEP	Predicted GO
CC	GO:0030684	preribosome	IEP	Predicted GO
CC	GO:0030686	90S preribosome	IEP	Predicted GO
CC	GO:0030688	preribosome, small subunit precursor	IEP	Predicted GO
CC	GO:0032299	ribonuclease H2 complex	IEP	Predicted GO
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	Predicted GO
BP	GO:0034470	ncRNA processing	IEP	Predicted GO
BP	GO:0034660	ncRNA metabolic process	IEP	Predicted GO
CC	GO:0044428	nuclear part	IEP	Predicted GO
BP	GO:0046483	heterocycle metabolic process	IEP	Predicted GO
BP	GO:0071826	ribonucleoprotein complex subunit organization	IEP	Predicted GO
BP	GO:0090304	nucleic acid metabolic process	IEP	Predicted GO
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	28	344

External Links

No external refs found!

Mp1g03220.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation