1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp1g03510.1

Mp1g03510.1


Description : component U1-70K of U1 small nuclear ribonucleoprotein particle (snRNP)


Gene families : OG_42_0004628 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004628_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp1g03510.1
Cluster HCAA Clusters: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
154282 No alias U1 small nuclear ribonucleoprotein-70K 0.02 Orthogroups_2024-Update
Glyma.01G175100 No alias U1 small nuclear ribonucleoprotein-70K 0.02 Orthogroups_2024-Update
Glyma.11G067300 No alias U1 small nuclear ribonucleoprotein-70K 0.02 Orthogroups_2024-Update
LOC_Os10g02630 No alias transposon protein, putative, CACTA, En/Spm sub-class, expressed 0.01 Orthogroups_2024-Update
Pp1s42_265V6 No alias u1 snrnp 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Predicted GO
MF GO:0005548 phospholipid transporter activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
MF GO:0015109 chromate transmembrane transporter activity IEP Predicted GO
BP GO:0015703 chromate transport IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
BP GO:0015914 phospholipid transport IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
BP GO:0030488 tRNA methylation IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
CC GO:0034708 methyltransferase complex IEP Predicted GO
CC GO:0043527 tRNA methyltransferase complex IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR022023 U1snRNP70_N 41 129
IPR000504 RRM_dom 140 209
No external refs found!