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At5g03850


Description : 40S ribosomal protein S28-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR73]


Gene families : OG_42_0002582 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002582_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g03850
Cluster HCCA clusters: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
170205 No alias Nucleic acid-binding, OB-fold-like protein 0.03 Orthogroups_2024-Update
Bradi3g00500 No alias Nucleic acid-binding, OB-fold-like protein 0.05 Orthogroups_2024-Update
Bradi4g13890 No alias Nucleic acid-binding, OB-fold-like protein 0.04 Orthogroups_2024-Update
Bradi4g13910 No alias Nucleic acid-binding, OB-fold-like protein 0.02 Orthogroups_2024-Update
Brara.C00134.1 No alias component *(eS28) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Brara.F02295.1 No alias component *(eS28) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Cre12.g510450 No alias Nucleic acid-binding, OB-fold-like protein 0.04 Orthogroups_2024-Update
GRMZM2G124143 No alias Nucleic acid-binding, OB-fold-like protein 0.04 Orthogroups_2024-Update
GRMZM2G455828 No alias Nucleic acid-binding, OB-fold-like protein 0.05 Orthogroups_2024-Update
HORVU3Hr1G115820.3 No alias component *(eS28) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Kfl00237_0050 kfl00237_0050_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Pp1s21_362V6 No alias 40s ribosomal protein s28 0.09 Orthogroups_2024-Update
Pp1s279_27V6 No alias 40s ribosomal protein s28 0.07 Orthogroups_2024-Update
Pp1s313_15V6 No alias 40s ribosomal protein s28 0.05 Orthogroups_2024-Update
Pp1s34_107V6 No alias 40s ribosomal protein s28 0.06 Orthogroups_2024-Update
Sobic.001G402050.1 No alias component *(eS28) of small ribosomal-subunit (SSU) proteome 0.08 Orthogroups_2024-Update
Sobic.001G493001.1 No alias component *(eS28) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Solyc02g021400 No alias 40S ribosomal protein S28 (AHRD V3.3 *-* W9SEX7_9ROSA) 0.07 Orthogroups_2024-Update
Solyc10g078630 No alias 40S ribosomal protein S28 (AHRD V3.3 *-* W9SEX7_9ROSA) 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000289 Ribosomal_S28e 4 63
No external refs found!