1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At5g04220

At5g04220


Description : Synaptotagmin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA06]


Gene families : OG_42_0000345 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000345_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g04220
Cluster HCCA clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
140025 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 Orthogroups_2024-Update
81096 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 Orthogroups_2024-Update
Bradi4g36490 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.04 Orthogroups_2024-Update
Mp6g02520.1 No alias Synaptotagmin-5 OS=Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
Seita.1G149300.1 No alias membrane tethering protein (SYT1) of... 0.04 Orthogroups_2024-Update
Seita.6G109800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen07g003670 No alias C2 domain 0.03 Orthogroups_2024-Update
Sopen10g006510 No alias C2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
MF GO:0003883 CTP synthase activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000008 C2_dom 199 301
IPR000008 C2_dom 40 139
No external refs found!