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  5. Mp1g17560.1

Mp1g17560.1


Description : pectin methylesterase


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp1g17560.1
Cluster HCAA Clusters: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
164202 No alias pectin methylesterase 31 0.01 Orthogroups_2024-Update
A4A49_15237 No alias putative pectinesterase 67 0.01 Orthogroups_2024-Update
A4A49_38924 No alias putative pectinesterase 53 0.02 Orthogroups_2024-Update
At3g24130 No alias Probable pectinesterase 29... 0.02 Orthogroups_2024-Update
At5g19730 No alias Probable pectinesterase 53... 0.03 Orthogroups_2024-Update
Glyma.11G032700 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.19G025500 No alias pectin methylesterase 31 0.02 Orthogroups_2024-Update
Glyma.19G145700 No alias Pectin lyase-like superfamily protein 0.01 Orthogroups_2024-Update
Kfl00053_0010 kfl00053_0010_v1.1 (at3g29090 : 107.0) Encodes an atypical pectin... 0.02 Orthogroups_2024-Update
PSME_00015801-RA No alias (at5g19730 : 236.0) Pectin lyase-like superfamily... 0.04 Orthogroups_2024-Update
PSME_00029824-RA No alias (at2g21610 : 293.0) pectinesterase 11 (PE11); FUNCTIONS... 0.01 Orthogroups_2024-Update
Solyc10g083810 No alias No description available 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA 16Dec
BP GO:0042545 cell wall modification IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 183 478
No external refs found!